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P0C6Z2

- NSP6_ROTBU

UniProt

P0C6Z2 - NSP6_ROTBU

Protein

Non-structural protein 6

Gene
N/A
Organism
Rotavirus A (strain Cow/United Kingdom/UK/1975 G6-P7[5]-I2-R2-C2-M2-A3-N2-T7-E2-H3) (RV-A)
Status
Reviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
  1. Names & Taxonomyi

    Protein namesi
    Recommended name:
    Non-structural protein 6
    Short name:
    NSP6
    OrganismiRotavirus A (strain Cow/United Kingdom/UK/1975 G6-P7[5]-I2-R2-C2-M2-A3-N2-T7-E2-H3) (RV-A)
    Taxonomic identifieri10934 [NCBI]
    Taxonomic lineageiVirusesdsRNA virusesReoviridaeSedoreovirinaeRotavirusRotavirus A
    Virus hostiBos taurus (Bovine) [TaxID: 9913]
    ProteomesiUP000008657: Genome

    Subcellular locationi

    Host cytoplasm 1 Publication
    Note: Found in spherical cytoplasmic structures, called virus factories, that appear early after infection and are the site of viral replication and packaging.

    GO - Cellular componenti

    1. host cell cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Host cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 9898Non-structural protein 6PRO_0000369514Add
    BLAST

    Interactioni

    Subunit structurei

    Interacts with NSP5.By similarity

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the rotavirus A NSP6 family.Curated

    Family and domain databases

    InterProiIPR006950. Rotavirus_NSP6.
    [Graphical view]
    PfamiPF04866. Rota_NS6. 1 hit.
    [Graphical view]
    ProDomiPD008065. Rota_NS6. 1 hit.
    [Graphical view] [Entries sharing at least one domain]

    Sequencei

    Sequence statusi: Complete.

    P0C6Z2-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNHLQQRQLF LENLLVGVNN MFHQMQKRPV NTCCRSLQKI LDHLILLQTI   50
    HSPAFRLDQM QLRQMQTLAC LWIHQYNHDH QVTLGAIKWI SPLIKELK 98
    Length:98
    Mass (Da):11,693
    Last modified:April 14, 2009 - v1
    Checksum:iC9752DA122E325E5
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    K03385 Genomic RNA. No translation available.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    K03385 Genomic RNA. No translation available.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Family and domain databases

    InterProi IPR006950. Rotavirus_NSP6.
    [Graphical view ]
    Pfami PF04866. Rota_NS6. 1 hit.
    [Graphical view ]
    ProDomi PD008065. Rota_NS6. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    ProtoNeti Search...

    Publicationsi

    1. "Structural homologies between RNA gene segments 10 and 11 from UK bovine, simian SA11, and human Wa rotaviruses."
      Ward C.W., Azad A.A., Dyall-Smith M.L.
      Virology 144:328-336(1985) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].
    2. "Characterization of the NSP6 protein product of rotavirus gene 11."
      Rainsford E.W., McCrae M.A.
      Virus Res. 130:193-201(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: CHARACTERIZATION, SUBCELLULAR LOCATION.

    Entry informationi

    Entry nameiNSP6_ROTBU
    AccessioniPrimary (citable) accession number: P0C6Z2
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: April 14, 2009
    Last sequence update: April 14, 2009
    Last modified: October 1, 2014
    This is version 10 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programViral Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3