ID R1AB_BC512 Reviewed; 6793 AA. AC P0C6W0; Q0Q467; DT 10-JUN-2008, integrated into UniProtKB/Swiss-Prot. DT 10-JUN-2008, sequence version 1. DT 27-MAR-2024, entry version 104. DE RecName: Full=Replicase polyprotein 1ab; DE Short=pp1ab; DE AltName: Full=ORF1ab polyprotein; DE Contains: DE RecName: Full=Non-structural protein 1; DE Short=nsp1; DE AltName: Full=p9; DE Contains: DE RecName: Full=Non-structural protein 2; DE Short=nsp2; DE AltName: Full=p87; DE Contains: DE RecName: Full=Non-structural protein 3; DE Short=nsp3; DE EC=3.4.19.12; DE EC=3.4.22.-; DE AltName: Full=PL1-PRO/PL2-PRO; DE AltName: Full=PLP1/PLP2; DE AltName: Full=Papain-like proteinases 1/2; DE AltName: Full=p195; DE Contains: DE RecName: Full=Non-structural protein 4; DE Short=nsp4; DE AltName: Full=Peptide HD2; DE Contains: DE RecName: Full=3C-like proteinase; DE Short=3CL-PRO; DE Short=3CLp; DE EC=3.4.22.-; DE AltName: Full=M-PRO; DE AltName: Full=nsp5; DE AltName: Full=p34; DE Contains: DE RecName: Full=Non-structural protein 6; DE Short=nsp6; DE Contains: DE RecName: Full=Non-structural protein 7; DE Short=nsp7; DE AltName: Full=p5; DE Contains: DE RecName: Full=Non-structural protein 8; DE Short=nsp8; DE AltName: Full=p23; DE Contains: DE RecName: Full=Viral protein genome-linked nsp9; DE AltName: Full=Non-structural protein 9; DE Short=nsp9; DE AltName: Full=RNA-capping enzyme subunit nsp9; DE Contains: DE RecName: Full=Non-structural protein 10; DE Short=nsp10; DE AltName: Full=Growth factor-like peptide; DE Short=GFL; DE AltName: Full=p14; DE Contains: DE RecName: Full=RNA-directed RNA polymerase nsp12; DE Short=Pol; DE Short=RdRp; DE EC=2.7.7.48; DE EC=2.7.7.50; DE AltName: Full=nsp12; DE AltName: Full=p100; DE Contains: DE RecName: Full=Helicase; DE Short=Hel; DE EC=3.6.4.12; DE EC=3.6.4.13; DE AltName: Full=nsp13; DE AltName: Full=p66; DE AltName: Full=p66-HEL; DE Contains: DE RecName: Full=Exoribonuclease; DE Short=ExoN; DE EC=3.1.13.-; DE AltName: Full=nsp14; DE Contains: DE RecName: Full=Uridylate-specific endoribonuclease; DE EC=4.6.1.-; DE AltName: Full=NendoU; DE AltName: Full=nsp15; DE Contains: DE RecName: Full=Putative 2'-O-methyl transferase; DE EC=2.1.1.57; DE AltName: Full=nsp16; GN Name=rep; ORFNames=1a-1b; OS Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005). OC Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; OC Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; OC Alphacoronavirus; Pedacovirus. OX NCBI_TaxID=693999; OH NCBI_TaxID=153297; Scotophilus kuhlii (Lesser asiatic yellow bat). RN [1] RP NUCLEOTIDE SEQUENCE [GENOMIC RNA]. RX PubMed=16840328; DOI=10.1128/jvi.00697-06; RA Tang X.C., Zhang J.X., Zhang S.Y., Wang P., Fan X.H., Li L.F., Li G., RA Dong B.Q., Liu W., Cheung C.L., Xu K.M., Song W.J., Vijaykrishna D., RA Poon L.L.M., Peiris J.S.M., Smith G.J., Chen H., Guan Y.; RT "Prevalence and genetic diversity of coronaviruses in bats from China."; RL J. Virol. 80:7481-7490(2006). CC -!- FUNCTION: The replicase polyprotein of coronaviruses is a CC multifunctional protein: it contains the activities necessary for the CC transcription of negative stranded RNA, leader RNA, subgenomic mRNAs CC and progeny virion RNA as well as proteinases responsible for the CC cleavage of the polyprotein into functional products. CC -!- FUNCTION: The papain-like proteinase 1 (PLP1) and papain-like CC proteinase 2 (PLP2) are responsible for the cleavages located at the N- CC terminus of the replicase polyprotein. In addition, PLP2 possesses a CC deubiquitinating/deISGylating activity and processes both 'Lys-48'- and CC 'Lys-63'-linked polyubiquitin chains from cellular substrates. PLP2 CC also antagonizes innate immune induction of type I interferon by CC blocking the nuclear translocation of host IRF-3 (By similarity). CC {ECO:0000250}. CC -!- FUNCTION: [3C-like proteinase]: Responsible for the majority of CC cleavages as it cleaves the C-terminus of replicase polyprotein at 11 CC sites. Recognizes substrates containing the core sequence [ILMVF]-Q-|- CC [SGACN]. Inhibited by the substrate-analog Cbz-Val-Asn-Ser-Thr-Leu-Gln- CC CMK. Also contains an ADP-ribose-1''-phosphate (ADRP)-binding function CC (By similarity). {ECO:0000255|PROSITE-ProRule:PRU00772}. CC -!- FUNCTION: The helicase which contains a zinc finger structure displays CC RNA and DNA duplex-unwinding activities with 5' to 3' polarity. ATPase CC activity is strongly stimulated by poly(U), poly(dT), poly(C), CC poly(dA), but not by poly(G) (By similarity). {ECO:0000250}. CC -!- FUNCTION: The exoribonuclease acts on both ssRNA and dsRNA in a 3' to CC 5' direction. {ECO:0000250}. CC -!- FUNCTION: Nsp7-nsp8 hexadecamer may possibly confer processivity to the CC polymerase, maybe by binding to dsRNA or by producing primers utilized CC by the latter. {ECO:0000250}. CC -!- FUNCTION: [Viral protein genome-linked nsp9]: Forms a primer, NSP9-pU, CC which is utilized by the polymerase for the initiation of RNA chains. CC Interacts with ribosome signal recognition particle RNA (SRP). Together CC with NSP8, suppress protein integration into the cell membrane, thereby CC disrupting host immune defenses. {ECO:0000250|UniProtKB:P0DTD1}. CC -!- FUNCTION: [RNA-directed RNA polymerase nsp12]: RNA-directed RNA CC polymerase that catalyzes the transcription of viral genomic and CC subgenomic RNAs. Acts in complex with nsp7 and nsp8 to transcribe both CC the minus and positive strands of genomic RNA. The kinase-like NiRAN CC domain of NSP12 attaches one or more nucleotides to the amino terminus CC of NSP9, forming a covalent RNA-protein intermediate that serves as CC transcription/replication primer. Subgenomic RNAs (sgRNAs) are formed CC by discontinuous transcription: The polymerase has the ability to pause CC at transcription-regulating sequences (TRS) and jump to the leader TRS, CC resulting in a major deletion. This creates a series of subgenomic RNAs CC that are replicated, transcribed and translated. In addition, Nsp12 is CC a subunit of the viral RNA capping enzyme that catalyzes the RNA CC guanylyltransferase reaction for genomic and sub-genomic RNAs. CC Subsequently, the NiRAN domain transfers RNA to GDP, and forms the core CC cap structure GpppA-RNA. {ECO:0000250|UniProtKB:P0DTD1}. CC -!- FUNCTION: [Uridylate-specific endoribonuclease]: Plays a role in viral CC transcription/replication and prevents the simultaneous activation of CC host cell dsRNA sensors, such as MDA5/IFIH1, OAS, and PKR (By CC similarity). Acts by degrading the 5'-polyuridines generated during CC replication of the poly(A) region of viral genomic and subgenomic RNAs. CC Catalyzes a two-step reaction in which a 2'3'-cyclic phosphate (2'3'- CC cP) is first generated by 2'-O transesterification, which is then CC hydrolyzed to a 3'-phosphate (3'-P) (By similarity). If not degraded, CC poly(U) RNA would hybridize with poly(A) RNA tails and activate host CC dsRNA sensors (By similarity). {ECO:0000250|UniProtKB:P0C6X7}. CC -!- CATALYTIC ACTIVITY: [Non-structural protein 3]: CC Reaction=Thiol-dependent hydrolysis of ester, thioester, amide, peptide CC and isopeptide bonds formed by the C-terminal Gly of ubiquitin (a 76- CC residue protein attached to proteins as an intracellular targeting CC signal).; EC=3.4.19.12; CC -!- CATALYTIC ACTIVITY: [RNA-directed RNA polymerase nsp12]: CC Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate + CC RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA- CC COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395; CC EC=2.7.7.48; Evidence={ECO:0000255|PROSITE-ProRule:PRU00539}; CC -!- CATALYTIC ACTIVITY: [Helicase]: CC Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065, CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616, CC ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.12; CC -!- CATALYTIC ACTIVITY: [Helicase]: CC Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065, CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616, CC ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.13; CC -!- CATALYTIC ACTIVITY: [RNA-directed RNA polymerase nsp12]: CC Reaction=a 5'-end diphospho-ribonucleoside in mRNA + GTP + H(+) = a 5'- CC end (5'-triphosphoguanosine)-(ribonucleoside) in mRNA + diphosphate; CC Xref=Rhea:RHEA:67012, Rhea:RHEA-COMP:17165, Rhea:RHEA-COMP:17166, CC ChEBI:CHEBI:15378, ChEBI:CHEBI:33019, ChEBI:CHEBI:37565, CC ChEBI:CHEBI:167616, ChEBI:CHEBI:167617; EC=2.7.7.50; CC Evidence={ECO:0000250|UniProtKB:P0DTD1}; CC PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:67013; CC Evidence={ECO:0000250|UniProtKB:P0DTD1}; CC -!- CATALYTIC ACTIVITY: [Putative 2'-O-methyl transferase]: CC Reaction=a 5'-end (N(7)-methyl 5'-triphosphoguanosine)-ribonucleoside CC in mRNA + S-adenosyl-L-methionine = a 5'-end (N(7)-methyl 5'- CC triphosphoguanosine)-(2'-O-methyl-ribonucleoside) in mRNA + H(+) + S- CC adenosyl-L-homocysteine; Xref=Rhea:RHEA:67020, Rhea:RHEA-COMP:17167, CC Rhea:RHEA-COMP:17168, ChEBI:CHEBI:15378, ChEBI:CHEBI:57856, CC ChEBI:CHEBI:59789, ChEBI:CHEBI:156461, ChEBI:CHEBI:167609; CC EC=2.1.1.57; Evidence={ECO:0000250|UniProtKB:P0C6X7}; CC -!- CATALYTIC ACTIVITY: [Uridylate-specific endoribonuclease]: CC Reaction=uridylyl-uridylyl-ribonucleotide-RNA = a 3'-end uridylyl- CC 2',3'-cyclophospho-uridine-RNA + a 5'-end dephospho-ribonucleoside- CC RNA; Xref=Rhea:RHEA:67732, Rhea:RHEA-COMP:13936, Rhea:RHEA- CC COMP:17334, Rhea:RHEA-COMP:17335, ChEBI:CHEBI:138284, CC ChEBI:CHEBI:173079, ChEBI:CHEBI:173080; CC Evidence={ECO:0000250|UniProtKB:P0C6X7}; CC -!- COFACTOR: [Uridylate-specific endoribonuclease]: CC Name=Mn(2+); Xref=ChEBI:CHEBI:29035; CC Evidence={ECO:0000250|UniProtKB:P0C6X7}; CC Note=Likely affects Nsp15 binding to RNA. CC {ECO:0000250|UniProtKB:P0C6X7}; CC -!- SUBUNIT: 3CL-PRO exists as monomer and homodimer. Eight copies of nsp7 CC and eight copies of nsp8 assemble to form a heterohexadecamer. Nsp9 is CC a dimer. Nsp10 forms a dodecamer (By similarity). {ECO:0000250}. CC -!- SUBCELLULAR LOCATION: [Non-structural protein 3]: Host membrane CC {ECO:0000305}; Multi-pass membrane protein {ECO:0000305}. CC -!- SUBCELLULAR LOCATION: [Non-structural protein 4]: Host membrane CC {ECO:0000305}; Multi-pass membrane protein {ECO:0000305}. CC -!- SUBCELLULAR LOCATION: [Non-structural protein 6]: Host membrane CC {ECO:0000305}; Multi-pass membrane protein {ECO:0000305}. CC -!- SUBCELLULAR LOCATION: [Non-structural protein 7]: Host cytoplasm, host CC perinuclear region {ECO:0000250}. Note=nsp7, nsp8, nsp9 and nsp10 are CC localized in cytoplasmic foci, largely perinuclear. Late in infection, CC they merge into confluent complexes (By similarity). {ECO:0000250}. CC -!- SUBCELLULAR LOCATION: [Non-structural protein 8]: Host cytoplasm, host CC perinuclear region {ECO:0000250}. Note=nsp7, nsp8, nsp9 and nsp10 are CC localized in cytoplasmic foci, largely perinuclear. Late in infection, CC they merge into confluent complexes (By similarity). {ECO:0000250}. CC -!- SUBCELLULAR LOCATION: [Viral protein genome-linked nsp9]: Host CC cytoplasm, host perinuclear region {ECO:0000250}. Note=nsp7, nsp8, nsp9 CC and nsp10 are localized in cytoplasmic foci, largely perinuclear. Late CC in infection, they merge into confluent complexes (By similarity). CC {ECO:0000250}. CC -!- SUBCELLULAR LOCATION: [Non-structural protein 10]: Host cytoplasm, host CC perinuclear region {ECO:0000250}. Note=nsp7, nsp8, nsp9 and nsp10 are CC localized in cytoplasmic foci, largely perinuclear. Late in infection, CC they merge into confluent complexes (By similarity). {ECO:0000250}. CC -!- SUBCELLULAR LOCATION: [Helicase]: Host endoplasmic reticulum-Golgi CC intermediate compartment {ECO:0000305}. Note=The helicase interacts CC with the N protein in membranous complexes and colocalizes with sites CC of synthesis of new viral RNA. {ECO:0000250}. CC -!- SUBCELLULAR LOCATION: [Uridylate-specific endoribonuclease]: Host CC cytoplasm, host perinuclear region {ECO:0000250}. CC -!- ALTERNATIVE PRODUCTS: CC Event=Ribosomal frameshifting; Named isoforms=2; CC Name=Replicase polyprotein 1ab; Synonyms=pp1ab; CC IsoId=P0C6W0-1; Sequence=Displayed; CC Name=Replicase polyprotein 1a; Synonyms=pp1a, ORF1a polyprotein; CC IsoId=P0C6F6-1; Sequence=External; CC -!- DOMAIN: The hydrophobic domains (HD) could mediate the membrane CC association of the replication complex and thereby alter the CC architecture of the host cell membrane. {ECO:0000250}. CC -!- PTM: Specific enzymatic cleavages in vivo by its own proteases yield CC mature proteins. 3CL-PRO and PL-PRO proteinases are autocatalytically CC processed (By similarity). {ECO:0000250}. CC -!- MISCELLANEOUS: Bat coronavirus 512/2005 is highly similar to porcine CC epidemic diarrhea virus (PEDV). CC -!- MISCELLANEOUS: [Isoform Replicase polyprotein 1ab]: Produced by -1 CC ribosomal frameshifting at the 1a-1b genes boundary. CC -!- SIMILARITY: Belongs to the coronaviruses polyprotein 1ab family. CC {ECO:0000305}. CC --------------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution (CC BY 4.0) License CC --------------------------------------------------------------------------- DR EMBL; DQ648858; ABG47077.1; -; Genomic_RNA. DR RefSeq; YP_001351683.1; NC_009657.1. [P0C6W0-1] DR SMR; P0C6W0; -. DR MEROPS; C30.003; -. DR GeneID; 11266518; -. DR KEGG; vg:11266518; -. DR Proteomes; UP000113079; Genome. DR GO; GO:0044172; C:host cell endoplasmic reticulum-Golgi intermediate compartment; IEA:UniProtKB-SubCell. DR GO; GO:0033644; C:host cell membrane; IEA:UniProtKB-SubCell. DR GO; GO:0044220; C:host cell perinuclear region of cytoplasm; IEA:UniProtKB-SubCell. DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW. DR GO; GO:0000175; F:3'-5'-RNA exonuclease activity; IEA:InterPro. DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW. DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:RHEA. DR GO; GO:0004843; F:cysteine-type deubiquitinase activity; IEA:UniProtKB-EC. DR GO; GO:0004197; F:cysteine-type endopeptidase activity; IEA:InterPro. DR GO; GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW. DR GO; GO:0016829; F:lyase activity; IEA:UniProtKB-KW. DR GO; GO:0004483; F:mRNA (nucleoside-2'-O-)-methyltransferase activity; IEA:InterPro. DR GO; GO:0004482; F:mRNA 5'-cap (guanine-N7-)-methyltransferase activity; IEA:InterPro. DR GO; GO:0008242; F:omega peptidase activity; IEA:InterPro. DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW. DR GO; GO:0003724; F:RNA helicase activity; IEA:UniProtKB-EC. DR GO; GO:0003968; F:RNA-dependent RNA polymerase activity; IEA:UniProtKB-KW. DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro. DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro. DR GO; GO:0039520; P:induction by virus of host autophagy; IEA:UniProtKB-KW. DR GO; GO:0039648; P:modulation by symbiont of host protein ubiquitination; IEA:UniProtKB-KW. DR GO; GO:0006508; P:proteolysis; IEA:UniProtKB-KW. DR GO; GO:0039548; P:suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway via inhibition of IRF3 activity; IEA:UniProtKB-KW. DR GO; GO:0019082; P:viral protein processing; IEA:InterPro. DR GO; GO:0039694; P:viral RNA genome replication; IEA:InterPro. DR CDD; cd21409; 1B_cv_Nsp13-like; 1. DR CDD; cd21901; alpha_betaCoV_Nsp10; 1. DR CDD; cd21558; alphaCoV-Nsp6; 1. DR CDD; cd21723; alphaCoV_Nsp13-helicase; 1. DR CDD; cd21660; alphaCoV_Nsp14; 1. DR CDD; cd21514; alphaCoV_Nsp2_HCoV-229E-like; 1. DR CDD; cd21665; alphaCoV_Nsp5_Mpro; 1. DR CDD; cd21826; alphaCoV_Nsp7; 1. DR CDD; cd21830; alphaCoV_Nsp8; 1. DR CDD; cd21897; alphaCoV_Nsp9; 1. DR CDD; cd21731; alphaCoV_PLPro; 1. DR CDD; cd21588; alphaCoV_RdRp; 1. DR CDD; cd20762; capping_2-OMTase_Nidovirales; 1. DR CDD; cd21473; cv_Nsp4_TM; 1. DR CDD; cd21167; M_alpha_beta_cv_Nsp15-like; 1. DR CDD; cd21557; Macro_X_Nsp3-like; 1. DR CDD; cd21161; NendoU_cv_Nsp15-like; 1. DR CDD; cd21171; NTD_alpha_betaCoV_Nsp15-like; 1. DR CDD; cd21875; PEDV-like_alphaCoV_Nsp1; 1. DR CDD; cd21689; stalk_CoV_Nsp13-like; 1. DR CDD; cd21712; TM_Y_alphaCoV_Nsp3_C; 1. DR CDD; cd21401; ZBD_cv_Nsp13-like; 1. DR Gene3D; 1.10.8.1190; -; 2. DR Gene3D; 3.10.20.540; -; 1. DR Gene3D; 3.40.50.11580; -; 1. DR Gene3D; 6.10.140.2090; -; 1. DR Gene3D; 1.10.150.420; Coronavirus nonstructural protein 4 C-terminus; 1. DR Gene3D; 3.40.220.10; Leucine Aminopeptidase, subunit E, domain 1; 1. DR Gene3D; 1.10.1840.10; main proteinase (3clpro) structure, domain 3; 1. DR Gene3D; 3.30.160.820; Nsp15 N-terminal domain-like; 1. DR Gene3D; 1.10.8.370; nsp7 replicase; 1. DR Gene3D; 3.30.70.3540; Nsp8 replicase, head domain; 1. DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2. DR Gene3D; 2.40.10.250; Replicase NSP9; 1. DR Gene3D; 2.40.10.10; Trypsin-like serine proteases; 2. DR Gene3D; 3.40.50.150; Vaccinia Virus protein VP39; 1. DR InterPro; IPR027351; (+)RNA_virus_helicase_core_dom. DR InterPro; IPR046443; a/bCoV_NSP1_glob. DR InterPro; IPR046440; AV_NSP11N_COV_NSP15M. DR InterPro; IPR043608; CoV_NSP15_M. DR InterPro; IPR043606; CoV_NSP15_N. DR InterPro; IPR043613; CoV_NSP2_C. DR InterPro; IPR047573; CoV_NSP2_M. DR InterPro; IPR043611; CoV_NSP3_C. DR InterPro; IPR047566; CoV_NSP3_Y3. DR InterPro; IPR032505; CoV_NSP4_C. DR InterPro; IPR043612; CoV_NSP4_N. DR InterPro; IPR043502; DNA/RNA_pol_sf. DR InterPro; IPR041679; DNA2/NAM7-like_C. DR InterPro; IPR037227; EndoU-like. DR InterPro; IPR002589; Macro_dom. DR InterPro; IPR043472; Macro_dom-like. DR InterPro; IPR044371; Macro_X_NSP3-like. DR InterPro; IPR046435; N7_MTase_CoV. DR InterPro; IPR043609; NendoU_nidovirus. DR InterPro; IPR044863; NIRAN. DR InterPro; IPR046438; NIV_2_O_MTASE. DR InterPro; IPR046436; NIV_EXON. DR InterPro; IPR036333; NSP10_sf_CoV. DR InterPro; IPR047570; NSP12_IF_CoV. DR InterPro; IPR044343; NSP13_1B_dom_CoV. DR InterPro; IPR047912; Nsp13_helicase_alphaCoV. DR InterPro; IPR048673; NSP13_stalk_CoV. DR InterPro; IPR048672; NSP13_ZBD_CoV. DR InterPro; IPR027352; NSP13_ZBD_CoV-like. DR InterPro; IPR044313; NSP14_alphaCoV. DR InterPro; IPR009466; NSP14_CoV. DR InterPro; IPR044330; NSP15_alpha_betaCoV_N. DR InterPro; IPR044322; NSP15_M_alpha_beta_CoV. DR InterPro; IPR043174; NSP15_middle_sf. DR InterPro; IPR042515; NSP15_N_CoV. DR InterPro; IPR044401; NSP15_NendoU_CoV. DR InterPro; IPR009461; NSP16_CoV-like. DR InterPro; IPR044385; NSP2_HCoV-229E-like. DR InterPro; IPR043615; NSP2_N_CoV. DR InterPro; IPR044357; NSP3_Ubl1_dom_CoV. DR InterPro; IPR044353; Nsp3_Ubl2_dom_CoV. DR InterPro; IPR038123; NSP4_C_sf_CoV. DR InterPro; IPR044309; NSP5_Mpro_alphaCoV. DR InterPro; IPR044369; NSP6_alphaCoV. DR InterPro; IPR043610; NSP6_CoV. DR InterPro; IPR014828; NSP7_CoV. DR InterPro; IPR037204; NSP7_sf_CoV. DR InterPro; IPR014829; NSP8_CoV. DR InterPro; IPR037230; NSP8_sf_CoV. DR InterPro; IPR014822; NSP9_CoV. DR InterPro; IPR036499; NSP9_sf_CoV. DR InterPro; IPR027417; P-loop_NTPase. DR InterPro; IPR013016; Peptidase_C16_CoV. DR InterPro; IPR008740; Peptidase_C30_CoV. DR InterPro; IPR043477; Peptidase_C30_dom3_CoV. DR InterPro; IPR009003; Peptidase_S1_PA. DR InterPro; IPR043504; Peptidase_S1_PA_chymotrypsin. DR InterPro; IPR043177; PLpro_N_sf_CoV. DR InterPro; IPR043178; PLpro_thumb_sf_CoV. DR InterPro; IPR044356; RdRp_alphaCoV. DR InterPro; IPR046441; RdRp_CoV. DR InterPro; IPR009469; RdRp_N_CoV. DR InterPro; IPR001205; RNA-dir_pol_C. DR InterPro; IPR007094; RNA-dir_pol_PSvirus. DR InterPro; IPR018995; RNA_synth_NSP10_CoV. DR InterPro; IPR029063; SAM-dependent_MTases_sf. DR PANTHER; PTHR43788; DNA2/NAM7 HELICASE FAMILY MEMBER; 1. DR PANTHER; PTHR43788:SF8; HELICASE WITH ZINC FINGER 2; 1. DR Pfam; PF13087; AAA_12; 1. DR Pfam; PF13604; AAA_30; 1. DR Pfam; PF06471; CoV_ExoN; 1. DR Pfam; PF06460; CoV_Methyltr_2; 1. DR Pfam; PF09401; CoV_NSP10; 1. DR Pfam; PF20631; CoV_NSP13_1B; 1. DR Pfam; PF20633; CoV_NSP13_stalk; 1. DR Pfam; PF20632; CoV_NSP13_ZBD; 1. DR Pfam; PF19215; CoV_NSP15_C; 1. DR Pfam; PF19216; CoV_NSP15_M; 1. DR Pfam; PF19219; CoV_NSP15_N; 1. DR Pfam; PF19212; CoV_NSP2_C; 2. DR Pfam; PF19211; CoV_NSP2_N; 1. DR Pfam; PF19218; CoV_NSP3_C; 1. DR Pfam; PF16348; CoV_NSP4_C; 1. DR Pfam; PF19217; CoV_NSP4_N; 1. DR Pfam; PF19213; CoV_NSP6; 1. DR Pfam; PF08716; CoV_NSP7; 1. DR Pfam; PF08717; CoV_NSP8; 1. DR Pfam; PF08710; CoV_NSP9; 1. DR Pfam; PF08715; CoV_peptidase; 2. DR Pfam; PF06478; CoV_RPol_N; 1. DR Pfam; PF01661; Macro; 1. DR Pfam; PF05409; Peptidase_C30; 1. DR Pfam; PF00680; RdRP_1; 1. DR SMART; SM00506; A1pp; 1. DR SUPFAM; SSF144246; Coronavirus NSP10-like; 1. DR SUPFAM; SSF140367; Coronavirus NSP7-like; 1. DR SUPFAM; SSF143076; Coronavirus NSP8-like; 1. DR SUPFAM; SSF56672; DNA/RNA polymerases; 1. DR SUPFAM; SSF142877; EndoU-like; 1. DR SUPFAM; SSF52949; Macro domain-like; 1. DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1. DR SUPFAM; SSF101816; Replicase NSP9; 1. DR SUPFAM; SSF53335; S-adenosyl-L-methionine-dependent methyltransferases; 1. DR SUPFAM; SSF50494; Trypsin-like serine proteases; 1. DR PROSITE; PS51961; AV_NSP11N_COV_NSP15M; 1. DR PROSITE; PS51993; COV_3ECTO; 1. DR PROSITE; PS51952; COV_EXON_MTASE_COACT; 1. DR PROSITE; PS51954; COV_N7_MTASE; 1. DR PROSITE; PS51962; COV_NSP1; 1. DR PROSITE; PS52000; COV_NSP12_IF; 1. DR PROSITE; PS51948; COV_NSP12_RDRP; 1. DR PROSITE; PS51960; COV_NSP15_NTD; 1. DR PROSITE; PS51991; COV_NSP2_C; 1. DR PROSITE; PS51990; COV_NSP2_M; 1. DR PROSITE; PS51989; COV_NSP2_N; 1. DR PROSITE; PS51992; COV_NSP3_Y; 1. DR PROSITE; PS51943; COV_NSP3A_UBL; 1. DR PROSITE; PS51944; COV_NSP3D_UBL; 1. DR PROSITE; PS51946; COV_NSP4C; 1. DR PROSITE; PS51949; COV_NSP7; 1. DR PROSITE; PS51950; COV_NSP8; 1. DR PROSITE; PS51951; COV_NSP9_SSRNA_BD; 1. DR PROSITE; PS51653; CV_ZBD; 1. DR PROSITE; PS51442; M_PRO; 1. DR PROSITE; PS51154; MACRO; 1. DR PROSITE; PS51958; NENDOU; 1. DR PROSITE; PS51947; NIRAN; 1. DR PROSITE; PS51955; NIV_2_O_MTASE; 1. DR PROSITE; PS51953; NIV_EXON; 1. DR PROSITE; PS51124; PEPTIDASE_C16; 2. DR PROSITE; PS51657; PSRV_HELICASE; 1. DR PROSITE; PS50507; RDRP_SSRNA_POS; 1. PE 3: Inferred from homology; KW Activation of host autophagy by virus; ATP-binding; Disulfide bond; KW Endonuclease; Exonuclease; Helicase; Host cytoplasm; Host membrane; KW Host-virus interaction; Hydrolase; KW Inhibition of host innate immune response by virus; KW Inhibition of host IRF3 by virus; Inhibition of host RLR pathway by virus; KW Lyase; Membrane; Metal-binding; Methyltransferase; KW Modulation of host ubiquitin pathway by viral deubiquitinase; KW Modulation of host ubiquitin pathway by virus; Nuclease; KW Nucleotide-binding; Nucleotidyltransferase; Protease; Repeat; KW Ribosomal frameshifting; RNA-binding; RNA-directed RNA polymerase; KW Thiol protease; Transferase; Transmembrane; Transmembrane helix; KW Ubl conjugation pathway; Viral immunoevasion; Viral RNA replication; Zinc; KW Zinc-finger. FT CHAIN 1..110 FT /note="Non-structural protein 1" FT /evidence="ECO:0000250" FT /id="PRO_0000289911" FT CHAIN 111..897 FT /note="Non-structural protein 2" FT /evidence="ECO:0000250" FT /id="PRO_0000289912" FT CHAIN 898..2530 FT /note="Non-structural protein 3" FT /evidence="ECO:0000250" FT /id="PRO_0000289913" FT CHAIN 2531..3012 FT /note="Non-structural protein 4" FT /evidence="ECO:0000250" FT /id="PRO_0000289914" FT CHAIN 3013..3314 FT /note="3C-like proteinase" FT /evidence="ECO:0000250" FT /id="PRO_0000289915" FT CHAIN 3315..3590 FT /note="Non-structural protein 6" FT /evidence="ECO:0000250" FT /id="PRO_0000289916" FT CHAIN 3591..3673 FT /note="Non-structural protein 7" FT /evidence="ECO:0000250" FT /id="PRO_0000289917" FT CHAIN 3674..3868 FT /note="Non-structural protein 8" FT /evidence="ECO:0000250" FT /id="PRO_0000289918" FT CHAIN 3869..3976 FT /note="Viral protein genome-linked nsp9" FT /evidence="ECO:0000250" FT /id="PRO_0000289919" FT CHAIN 3977..4111 FT /note="Non-structural protein 10" FT /evidence="ECO:0000250" FT /id="PRO_0000289920" FT CHAIN 4112..5038 FT /note="RNA-directed RNA polymerase nsp12" FT /evidence="ECO:0000250" FT /id="PRO_0000289921" FT CHAIN 5039..5557 FT /note="Helicase" FT /evidence="ECO:0000250" FT /id="PRO_0000289922" FT CHAIN 5558..6153 FT /note="Exoribonuclease" FT /evidence="ECO:0000250" FT /id="PRO_0000289923" FT CHAIN 6154..6492 FT /note="Uridylate-specific endoribonuclease" FT /evidence="ECO:0000250" FT /id="PRO_0000289924" FT CHAIN 6493..6793 FT /note="Putative 2'-O-methyl transferase" FT /evidence="ECO:0000250" FT /id="PRO_0000289925" FT TRANSMEM 1973..1993 FT /note="Helical" FT /evidence="ECO:0000255" FT TRANSMEM 2036..2056 FT /note="Helical" FT /evidence="ECO:0000255" FT TRANSMEM 2119..2139 FT /note="Helical" FT /evidence="ECO:0000255" FT TRANSMEM 2141..2161 FT /note="Helical" FT /evidence="ECO:0000255" FT TRANSMEM 2164..2184 FT /note="Helical" FT /evidence="ECO:0000255" FT TRANSMEM 2543..2563 FT /note="Helical" FT /evidence="ECO:0000255" FT TRANSMEM 2634..2654 FT /note="Helical" FT /evidence="ECO:0000255" FT TRANSMEM 2669..2689 FT /note="Helical" FT /evidence="ECO:0000255" FT TRANSMEM 2769..2789 FT /note="Helical" FT /evidence="ECO:0000255" FT TRANSMEM 2802..2822 FT /note="Helical" FT /evidence="ECO:0000255" FT TRANSMEM 2829..2849 FT /note="Helical" FT /evidence="ECO:0000255" FT TRANSMEM 2878..2898 FT /note="Helical" FT /evidence="ECO:0000255" FT TRANSMEM 3351..3371 FT /note="Helical" FT /evidence="ECO:0000255" FT TRANSMEM 3376..3396 FT /note="Helical" FT /evidence="ECO:0000255" FT TRANSMEM 3414..3434 FT /note="Helical" FT /evidence="ECO:0000255" FT TRANSMEM 3443..3463 FT /note="Helical" FT /evidence="ECO:0000255" FT TRANSMEM 3466..3486 FT /note="Helical" FT /evidence="ECO:0000255" FT TRANSMEM 3488..3507 FT /note="Helical" FT /evidence="ECO:0000255" FT TRANSMEM 3511..3531 FT /note="Helical" FT /evidence="ECO:0000255" FT DOMAIN 2..109 FT /note="CoV Nsp1 globular" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01307" FT DOMAIN 112..368 FT /note="CoV Nsp2 N-terminal" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01333" FT DOMAIN 396..785 FT /note="CoV Nsp2 middle" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01334" FT DOMAIN 776..897 FT /note="CoV Nsp2 C-terminal" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01335" FT DOMAIN 898..993 FT /note="Ubiquitin-like 1" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00214" FT DOMAIN 1069..1302 FT /note="Peptidase C16 1" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00444" FT DOMAIN 1303..1467 FT /note="Macro" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00490" FT DOMAIN 1638..1693 FT /note="Ubiquitin-like 2" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00214" FT DOMAIN 1699..1965 FT /note="Peptidase C16 2" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00444" FT DOMAIN 2052..2116 FT /note="3Ecto" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01337" FT DOMAIN 2190..2530 FT /note="CoV Nsp3 Y" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01336" FT DOMAIN 2917..3012 FT /note="Nsp4C" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01291" FT DOMAIN 3013..3314 FT /note="Peptidase C30" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00772" FT DOMAIN 3591..3673 FT /note="RdRp Nsp7 cofactor" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01294" FT DOMAIN 3674..3868 FT /note="RdRp Nsp8 cofactor" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01295" FT DOMAIN 3869..3976 FT /note="Nsp9 ssRNA-binding" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01296" FT DOMAIN 3977..4115 FT /note="ExoN/MTase coactivator" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01297" FT DOMAIN 4117..4366 FT /note="NiRAN" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01292" FT DOMAIN 4372..4470 FT /note="Nsp12 Interface" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01344" FT DOMAIN 4471..5038 FT /note="Nsp12 RNA-dependent RNA polymerase" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01293" FT DOMAIN 4718..4880 FT /note="RdRp catalytic" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00539" FT DOMAIN 5039..5151 FT /note="CV ZBD" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00986" FT DOMAIN 5296..5477 FT /note="(+)RNA virus helicase ATP-binding" FT DOMAIN 5478..5647 FT /note="(+)RNA virus helicase C-terminal" FT DOMAIN 5707..5921 FT /note="ExoN" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01298" FT DOMAIN 5930..6151 FT /note="N7-MTase" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01299" FT DOMAIN 6154..6214 FT /note="Nsp15 N-terminal oligomerization" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01305" FT DOMAIN 6215..6332 FT /note="AV-Nsp11N/CoV-Nsp15M" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01306" FT DOMAIN 6349..6489 FT /note="NendoU" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01303" FT DOMAIN 6493..6789 FT /note="Nidovirus-type SAM-dependent 2'-O-MTase" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01300" FT ZN_FING 1174..1205 FT /note="C4-type 1; degenerate" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00444" FT ZN_FING 1816..1849 FT /note="C4-type 2; degenerate" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00444" FT ZN_FING 4050..4066 FT /evidence="ECO:0000250" FT ZN_FING 4092..4105 FT /evidence="ECO:0000250" FT REGION 1973..2184 FT /note="HD1" FT /evidence="ECO:0000250" FT REGION 2190..2280 FT /note="Y1" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01336" FT REGION 2194..2207 FT /note="ZF1" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01336" FT REGION 2240..2250 FT /note="ZF2" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01336" FT REGION 2281..2530 FT /note="CoV-Y" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01336" FT REGION 2281..2370 FT /note="Y2" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01336" FT REGION 2371..2428 FT /note="Y3" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01336" FT REGION 2429..2530 FT /note="Y4" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01336" FT REGION 2543..2898 FT /note="HD2" FT /evidence="ECO:0000250" FT REGION 3351..3531 FT /note="HD3" FT /evidence="ECO:0000250" FT REGION 4473..4687 FT /note="RdRp Fingers N-ter" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01293" FT REGION 4688..4726 FT /note="RdRp Palm N-ter" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01293" FT REGION 4727..4785 FT /note="RdRp Fingers C-ter" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01293" FT REGION 4786..4921 FT /note="RdRp Palm C-ter" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01293" FT REGION 4922..5038 FT /note="RdRp Thumb" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01293" FT REGION 6042..6056 FT /note="GpppA-binding" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01299" FT ACT_SITE 1103 FT /note="For PL1-PRO activity" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00444" FT ACT_SITE 1252 FT /note="For PL1-PRO activity" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00444" FT ACT_SITE 1265 FT /note="For PL1-PRO activity" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00444" FT ACT_SITE 1737 FT /note="For PL2-PRO activity" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00444" FT ACT_SITE 1902 FT /note="For PL2-PRO activity" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00444" FT ACT_SITE 1915 FT /note="For PL2-PRO activity" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00444" FT ACT_SITE 3053 FT /note="For 3CL-PRO activity" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00772" FT ACT_SITE 3156 FT /note="For 3CL-PRO activity" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00772" FT ACT_SITE 4865 FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01293" FT ACT_SITE 4866 FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01293" FT ACT_SITE 4867 FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01293" FT ACT_SITE 5725 FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01298" FT ACT_SITE 5727 FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01298" FT ACT_SITE 5826 FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01298" FT ACT_SITE 5902 FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01298" FT ACT_SITE 5907 FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01298" FT ACT_SITE 6379 FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01303" FT ACT_SITE 6394 FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01303" FT ACT_SITE 6435 FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01303" FT ACT_SITE 6537 FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01300" FT ACT_SITE 6621 FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01300" FT ACT_SITE 6661 FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01300" FT ACT_SITE 6694 FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01300" FT BINDING 2194 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="1" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01336" FT BINDING 2199 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="1" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01336" FT BINDING 2204 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="1" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01336" FT BINDING 2207 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="1" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01336" FT BINDING 2240 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="2" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01336" FT BINDING 2243 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="2" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01336" FT BINDING 2247 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="2" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01336" FT BINDING 2250 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="2" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01336" FT BINDING 4050 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="3" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01297" FT BINDING 4053 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="3" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01297" FT BINDING 4059 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="3" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01297" FT BINDING 4066 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="3" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01297" FT BINDING 4092 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="4" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01297" FT BINDING 4095 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="4" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01297" FT BINDING 4103 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="4" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01297" FT BINDING 4105 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="4" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01297" FT BINDING 4401 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="5" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01344" FT BINDING 4407 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="5" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01344" FT BINDING 4412 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="5" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01344" FT BINDING 4416 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="5" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01344" FT BINDING 4593 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="6" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01293" FT BINDING 4748 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="6" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01293" FT BINDING 4751 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="6" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01293" FT BINDING 4752 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="6" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01293" FT BINDING 5043 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="7" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00986" FT BINDING 5046 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="7" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00986" FT BINDING 5054 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="8" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00986" FT BINDING 5057 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="8" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00986" FT BINDING 5064 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="7" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00986" FT BINDING 5067 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="7" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00986" FT BINDING 5071 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="8" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00986" FT BINDING 5077 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="8" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00986" FT BINDING 5088 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="9" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00986" FT BINDING 5093 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="9" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00986" FT BINDING 5110 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="9" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00986" FT BINDING 5113 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="9" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00986" FT BINDING 5321..5328 FT /ligand="ATP" FT /ligand_id="ChEBI:CHEBI:30616" FT /evidence="ECO:0000250" FT BINDING 5842 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="10" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01298" FT BINDING 5844 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="10" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01298" FT BINDING 5860 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="10" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01298" FT BINDING 5863 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="10" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01298" FT BINDING 5891 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="11" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01298" FT BINDING 5895 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="11" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01298" FT BINDING 5898 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="11" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01298" FT BINDING 5913 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="11" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01298" FT BINDING 5965..5971 FT /ligand="S-adenosyl-L-methionine" FT /ligand_id="ChEBI:CHEBI:59789" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01299" FT BINDING 6080 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="12" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01299" FT BINDING 6097 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="12" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01299" FT BINDING 6108 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="12" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01299" FT BINDING 6111 FT /ligand="Zn(2+)" FT /ligand_id="ChEBI:CHEBI:29105" FT /ligand_label="12" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01299" FT SITE 110..111 FT /note="Cleavage; by PL1-PRO" FT /evidence="ECO:0000250" FT SITE 897..898 FT /note="Cleavage; by PL1-PRO" FT /evidence="ECO:0000250" FT SITE 2530..2531 FT /note="Cleavage; by PL2-PRO" FT /evidence="ECO:0000250" FT SITE 3012..3013 FT /note="Cleavage; by 3CL-PRO" FT /evidence="ECO:0000250" FT SITE 3314..3315 FT /note="Cleavage; by 3CL-PRO" FT /evidence="ECO:0000250" FT SITE 3590..3591 FT /note="Cleavage; by 3CL-PRO" FT /evidence="ECO:0000250" FT SITE 3673..3674 FT /note="Cleavage; by 3CL-PRO" FT /evidence="ECO:0000250" FT SITE 3868..3869 FT /note="Cleavage; by 3CL-PRO" FT /evidence="ECO:0000250" FT SITE 3976..3977 FT /note="Cleavage; by 3CL-PRO" FT /evidence="ECO:0000250" FT SITE 4111..4112 FT /note="Cleavage; by 3CL-PRO" FT /evidence="ECO:0000250" FT SITE 5038..5039 FT /note="Cleavage; by 3CL-PRO" FT /evidence="ECO:0000250" FT SITE 5557..5558 FT /note="Cleavage; by 3CL-PRO" FT /evidence="ECO:0000250" FT SITE 6153..6154 FT /note="Cleavage; by 3CL-PRO" FT /evidence="ECO:0000250" FT SITE 6492..6493 FT /note="Cleavage; by 3CL-PRO" FT /evidence="ECO:0000250" FT DISULFID 2068..2094 FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01337" FT DISULFID 2086..2091 FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01337" SQ SEQUENCE 6793 AA; 757262 MW; 6C76171F3E67FE1D CRC64; MASNHISLAF ANDEEISAIG FGSVEEAVSY YSDAAVNGFD QCRFVSLGLQ DAVVGVEDDD VVMLITGVTQ LRAYLGTFGD RPLNLRGWLL FSNCNYFLEE LDLVFGRCGG TTIPVDQFMC GADGAPVIQE GDWTFMDYFQ DSNQFTLNGI TYVKAWDVDR KPNDYAKQNV TCIRRITYIT DHRHVLADGT TMKTARHPKV NKSVVLDSPF DQIYKEVGSP FMGNGSTFVE MLKDPAFFHA LITCECGRSE WTVGDWKGYN SLCCNIKCKP ITIVTPKAVP GAVVITKAGI GAGLKCYNNV FLKHIIDLVV PGTNLGWGVW RIAKVQSKDD VATSGNVLVD DPEDRLDPCY FGNDGPFATK FKFQLLANSF DDEVKGAIVQ GVVHVNTAIC DVVKDILGLP WFVKKLGSLV TVMWDQFVAG VQSMKICTLK VVQLAKALSC ATMSVVKGVI TLVAEVPEIF KRLFYTLTSA LKSLCTSSCD ALVVAGKSFA KIGDYVLLPS ALVRLVSSKV KGKAQSGIKQ LQFATVVLGD THKVESDRVE FSSVNLKMVD EEFPLNPVGH TVAVGNQAFF CSDGLYRFMA DRDLVITSPI FKPELELEPI FECDAIPGFP KVAASNVAEL CVKVDTLLFN YDKIYKKYST IIKGDRCYIQ CTHTFKAPSY YFDDDEFVEL CTKYYKLPDF DAFYNAVHAA TDMDQFCALC TSGFEVFIPR VPDCPPILND IDGGSIWTSF ILSVRSATDF IKTLKIDLGL NGVVVFVTKK FRKAGALLQK LYNAFLDTVT SFIKVAGVAF KYCATCVPKI VINGCYHTVT RLFAKDLQIP TEDGVADFNT FNHCVFPVNP TRIETDSLEL EEVDFVEPGV DGKLVILDDY SFYSDGTNYY PSDGKGVVAS CFKKKGGGVV TISDEVQVRT IDPVYKVRLE YEFEDETLVK VCEKAIGTKL KVTGDWSNLL ETLEKAMDVV RQHLDVPDYF VYDEEGGTDL NLTIMVSQWP LSSDSEDDFK AVDDEPNANT DETVDTFAED VAETQNVQQD VTQDEVEAVC DLVVKATEEG PIEHEELSED QKEVQQALAF IEDKPVVVKP DVFAFSYASY GGLKVLNQSS NNCWVSSALV QLQLTGLLDS DEMQLFNAGR VSPMVKRCYE SQRAIFGSLG DVSACLESLL KDRDGMSITC TIDCGCGPGV RVYENAIFRF TPLKTAFPMG RCLICSKTLM HTITQMKGTG IFCRDATALD VDTLVVKPLC AAVYVGAQDG GHYLTNMYDA NMAVDGHGRH PIKFNTINTL CYKDVDWEVS NGSCDVKPFL TYKNIEFYQG ELSALLSVNH DFVVNAANEQ LSHGGGIAKA LDDLTKGELQ VLSNQYVSRN GSIKVGSGVL IKCKEHSILN VVGPRKGKHA AELLTKAYTF VFKQKGVPLM PLLSVGIFKV PITESLAAFL ACVGDRVCKC FCYTDKERLA IQNFVTSFQT EQPVEPLPVI QEVKGVQLEK PVPDVKVENP CEPFRIEGDA KFYDLTPSMV QSLQVTRLVS FTNSDLCLGS FVRDCDGYVQ GSLGGAIANY KKSNPVLPAG NCVTLKCDGF ISFTFVILPK EGDTNYEKNF NRAIAKFLKL KGSLLVVVED SSVFNKISHA SVAGYVAKPA LVDTLFEAKP VQVVVTQDQR SFHTVELSTS QTYGQQLGDC VVEDKKVTNL KPVSKDKVVS VVPNVDWDKH YGFVDAGIFH TLDHTMFVFD NNVVNGKRVL RTSDNNCWIN AVCLQLQFAN AKFKPKGLQQ LWESYCTGDV AMFVHWLYWI TGVEKGEPSD AENTLNIISR FLKPQGSVEM LRATSTTCDG TCSTKRVVST PVVNASVLKV GLDDGNCVHG LPLVDRVVSV NGTVIITNVG DTPGKPVVAT ENLLLDGVSY TVFQDSTTGV GHYTVFDKEA KLMFDGDVLK PCDLNVSPVT SVVVCNNKKI VVQDPVKRVE LDASKFLDTM NVASEKFFTF GDFVSRNIIV LIVYLFSLLA ICFRALKKRD MKVMAGVPER TGIILKRSVK YNYKALKFFF RLKFQYIKVF LKFSLVLYTL YALMFMFIRF TPVGTPICKR YTDGYANSTF DKNDYCGNVL CKICLYGYEE LSDFTHTRVI WQHLKDPLIG NILPLFYLVF LIIFGGFFVR IGITYFIMQY INAAGVALGY QDNVWLLHLL PFNSMGNIIV VAFIVTRILL FLKHVLFGCD KPSCIACSKS AKLTRVPLQT ILQGVTKSFY VNANGGKKFC KKHNFFCVDC DSYGYGCTFI NDVIAPELSN VTKLNVIPTG PATIIIDKVE FSNGFYYLYS GSTFWKYNFD ITEAKYACKD VLKNCNILTD FVVFNNSGSN VTQVKNACVY FSQLLCKPIK LVDSALLASL NVDFSANLHK AFVEVLSNSF GKDLSNCSNM NECRESLGLS DVPEEEFSAA VSEAHRYDVL ISDVSFNNLI VSYAKPEEKL AVHDIANCMR VGAKVVNHNV LTKDNVPVVW LAKDFIALSE EARKYIVRTT KTKGINFMLT FNDRRMHLTI PTISVANKKG AGLPSLFTRL YSFFWHLCVL IVVLFVATSL LDFSAQVTSD TQYDFKYIEN GVLKVFEKPL DCVHNAFVNF NEWHNAKFGS IPTNSRRCPI VVGTSDEVRY IPGVPAGVFL YGKSLIFAMS TIFGTSGLCF DDRGLTDPDS CIFNSACTTL SGIGGRNVYC YREGVVDNAK LYSSLLPHSY YRLMDGNHIV LPEIITRGFG IRTIKTQAMT YCRTGECIDS QAGVCVGLDR FFVYSKTPGS DYVCGTGFFS LLFNVIGMFS NSIPVTVMSG QILLNCVVAF TAVMACFAFT KFKRLFGDMS FGVLSVGLCT VVNNLSYVVT QNSIGMLAYA TLYFLCTKGV RYSWVWHVGF AISYCFLAPW WVVLAYLICA LLEFLPNLFK LKVSTQLFEG DKFVGSFESA ASGTFVLDMH SYQKLANSIS TEKLKQYCAS YNRYKYYSGS ASEADYRLAC FAHLAKAMSD FANDHMDKLY TPPTVSYNST LQAGLRKMAQ PSGIVEGCIV RVSYGNLTLN GLWLGDTVIC PRHVIASNTT NVIDYDHAMS LVRLHNFSIS SGNMFLGVIS ASMRGTLLHI KVNQSNVNTP NYTYKVLKPG DSFNILACYD GSAAGVYGVN MRTNYTIRGS FISGACGSPG YNINNGVVEF CYMHHLELGS GCHVGSDMDG TMYGKYEDQP TLQIEGASNL VTENVCSWLY GALINGDRWW LSSVSVGVDT YNEWALRNGM TALKNVDCFS LLVAKTGVDV GRLLASIQKL HGNFGGKSIL GCTSLCDEFT LSEVVKQMYG VTLQSGKVSR AFRNASIVCC LLFLFLSEML NHSKLFWINP GYITPVFLAI IVASSALMLL VKHKLLFLQL YLLPSLCIVS GYNIFKDYHF YTYMLEEFDY KVPFGGFNVT GVLNISLCCF VMGLHTFRFL QTPNKIFSYV VAVLTVLYTY YYSTDVLGLI LTSMSGFTNY WFIGTATYKL ATYVLPHTSL LDSFDAIKAV VFLYLLLGYC NCVYYGSLYW INRFCKLTLG CYEFKVSAAE FKYMVANGLR APTGVFDALI LSLKLIGVGG RKTIKISSVQ SKLTDLKCTN VVLLGCLSNM NIAANSREWA YCVDLHNKIN LCNDAEAAQE MLLALLAFFL SKNSAFGVDE LLDSYFNDSS VLQSVAATYV NLPSYLAYET ARQSYEDALA NGSPPQLVKQ LRHAMNVAKS EFDREASTQR KLDRMAEQAA SQMYKEARAV NRKSKVVSAM HSLLFGMLRR LDMSSVDTIL SLAKDGVVPL SIIPAVSATK LNIVVSDIES YSKIQREGCV HYAGVIWSVV DIKDNDGKPV HAKEVVTSNV ESLAWPLFLN CERIIKLQNN EIIPSKIKQR PIKAEGEGVV ADGNALYSNE GGRTFMYAFI SDKPDLKVVK WEFDGGSNAI ELEPPCKFLV EAPSGPVVKY LYFVRNLNNL RRGAVLGFIG ATVRLQAGKQ TEQATNSSLL TLCAFAVDPP KTYLDAVKSG HRPVGNCVKM LANGSGNGQA ITNGVEASTN QDSYGGASVC LYCRAHVEHP DMDGFCKLRG KYVQVPLGTL DPIRFVLENT VCKVCGCWQA NGCTCDRAVI QSVDSGYLNR VRGSSAARLE PLNGSDTHHV FRAFDVYNRD VACISKFLKV NCVRLKNLDK HDAFWIVKKC TKSVMEHEQS IYNLISDCGA VAKHDFFTWK EGRSVYGNVC RQDLTEYTMM DLCYALRNFD ENNCETLKKI LVVVGACDES YFDNKLWFDP VENEDVHRVY AKLGTIVARA MLKCVKYCDA MVEQGIVGVI TLDNQDLNGD FYDFGDFVTS VKGMGVPICT SYYSYMMPVM GMTNCLASEC FIKSDIFGED FRTFDLLAYD FTEHKVNLFN KYFKHWGQTY HPNCEDCHDE SCIVHCANFN TLFATTIPIT AFGPLCRKCW IDGVPLVTTA GYHFKQLGIV WNKDLNLHSS RLTINELLQF CADPSLLIAS SPALVDKRTV CFSVAALGTG MTNQTVKPGH FNREFYDFLR SQGFFEEGSE LTLKHFFFAQ KGDAAVRDFD YYRYNRTTVL DICQARVVYQ IVQCYFGMYE GGCITAKEVI VNNLNKSAGY PFNKFGKAGL YYDSLSYEEQ DDLYAYTKRN IIPTMTQLNL KYAISGKDRA RTVGGVSLLS TMTTRQYHQK HLKSIVNTRG ASVVIGTTKF YGGWDNMLKT LIKDVENPHL MGWDYPKCDR ALPNMIRMIS AMILGSKHVN CCSSSDRYYR LCNELAQVLT EMVYSNGGFY VKPGGTTSGD ATTAYANSVF NIFQATSANV NRLLSVDSNT CNNIEVKQLQ RKLYDCCYRS SSVDQSFVEE YFGYLRKHFS MMILSDDGVV CYNSEYAALG YVADLNAFKA VLYYQNNVFM SASKCWIEPD INKGPHEFCS QHTMQIVDKD GTYYLPYPDP SRILSAGVFV DDIVKTDPVI LLERYVSLAI DAYPLSKHDN PEYRRVFTVM LDWVKHLYKT LNQGVLDSFS VTLLEDATAK FWDESFYASM YEQSSVLQSA GLCVVCSSQT VLRCGDCIRR PMLCTKCAYD HVVSTSHKFI LAITPYVCCS SGCGVSDVTK LYLGGLSYWC VDHKPRLSFP LCSSGNVFGL YKNSATGSPD VDDFNTLATS DWTDVKDYKL ANDVKDSLRL FAAETIKAKE ESVKSSYACA TIHEVVGPKE LVLKWEVGKP RPPLSRNSVF TCYHITKNTK FQVGEFTFEK LDYDNDAVSY KSTATTKLVP GMVFVLTSHN VQPLRAPTII NQERYSTLHK LRPAFNIHED YSNLIPYYQL IGKQKLTTIQ GPPGSGKSHC VIGLGLYFPG ARIVFTACSH AAVDSLCVKA ATAYSSDRCS RIIPQKARIE CYDGFKSNNT SAQYLFSTVN ALPEVNADIC VVDEVSMCTN YDLSVINQRV NYRHIVYVGD PQQLPAPRVM ITRGVLVPED YNVVTRRMCV LKPDIFLHKC YRCPAEIVNT VSEMVYENQF VPVKSESKEC FKIYCRGNVQ VDNGSSINRR QLEVVRMFLA KNPKWAKAVF ISPYNSQNYV AGRVLGLQIQ TVDSSQGSEY DYVIYTQTSD TAHASNVNRF NVAITRAKKG ILCIMCDREL FDILKFYELK LSDLQVGDGC GLFKDCYKGE DNLPPSHAPT FMSLSDNFKT DKDLAVQIGV NGPVKYEHVI SFMGFRFDIN VPNQHTLFCT RDFAMRNARG WLGFDVEGAH VIGSNVGTNV PLQLGFSNGV DFVVRPEGCV STEVGDVIQP VRARAPPGDQ FTHLLPLLRK GQPWSVIRRR IVQMCSDYLA NLSDTLIFVL WSGGLELTTM RYFVKLGPVQ TCDCGKRATC YNSTNHTFSC FRHALGSDYI YNCYCIDIQQ WGYTGSLSMN HHEVCNIHRN EHVASGDAAM TRCLAIHDCF VKNVDWSITY PFIANEQAIN KSGRLVQSHV MRAVLKLYNP KAIHDVGNPK GIRCVVTDAS WYCYDKNPTN TNVKMLEYDY ITHGQLDGLC LFWNCNVDMY PEFSVVCRFD TRMRSTLNLE GCNGGSLYVN NHAFHTPAYD KRAFAKLKAM PFFFYDDSEC EKLQDAVNYV PLRASNCITR CNVGGAVCSK HCALYHNYVM AYNTFTTAGF TIWVPNSFDM FNLWQTFKNS NVQGLENIAY NVVKKGSFVG VEGELPVAVV NDKVMVRDGV SDNVVFVNNT SLPTNVAFEL YAKRKVGLTP PLTILKNLGV VCTSKCVLWD YEASRPLTTF TKDVCKYTDF DGDVCTLFDN SVPGAFERFT VTKNAVLISL TAVKKLTAIK LTYGYLNGVP VFTHEDKPFT WYIYTRKDGA FVEYPDGYFT QGRVISDFQP RSNMEEDFLN MDMGLFISKY GLEDYGFEHV VFGDVSKTTL GGLHLLISQI RLSKIGVLKV EDFVSSSDST LKSCTVTYVD NPSSKMVCTY VDLLLDDFVN ILKSVDLSVV SKVHEVVIDC KVWRWMLWCK DHKVQTFYPQ LQSAEWKCGY SMPSIYKIQR MCLEPCNLYN YGSGLKLPDG IMFNVVKYTQ LCQYLNSTTM CVPHHMRVLH LGAGSDKGVA PGTAVLRRWL PLDAVIVDND VNDYVSDADF SYTGDCASMY LTDKFDLVIS DMYDGRTKSC DGDNVSKEGF FPYINGVITE KLALGGTVAI KITEFSWNKK LYELIQKFEY WTLFCTSVNT SSSEAFLIGV HFLGDFSTNA IIDGNIMHAN YIFWRNSTIM TMSYNSVLDL SKFSCKHKAT VVVNLKDSSV TDLVLGLLKN GKLLIRNNGV VCGFSNHLVN STK //