Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

SV40 early leader protein

Gene
N/A
Organism
Simian virus 40 (SV40)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

May play a role in the lytic cycle.1 Publication

Names & Taxonomyi

Protein namesi
Recommended name:
SV40 early leader protein
Short name:
SELP
OrganismiSimian virus 40 (SV40)
Taxonomic identifieri1891767 [NCBI]
Taxonomic lineageiVirusesdsDNA viruses, no RNA stagePolyomaviridae
Virus hostiMacaca (macaques) [TaxID: 9539]
Proteomesi
  • UP000007705 Componenti: Genome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003552001 – 23SV40 early leader proteinAdd BLAST23

Family & Domainsi

Sequence similaritiesi

Sequences (4)i

Sequence statusi: Complete.

This entry describes 4 isoformsi produced by alternative splicing and alternative initiation. AlignAdd to basket

Isoform SELP (identifier: P0C6L2-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

        10         20 
MQRPRPPRPL SYSRSSEEAF LEA
Note: Produced by alternative initiation.
Length:23
Mass (Da):2,705
Last modified:November 25, 2008 - v1
Checksum:i0FA3C80E15ED0C93
GO
Isoform Large T antigen (identifier: P03070-1) [UniParc]FASTAAdd to basket
The sequence of this isoform can be found in the external entry P03070.
Isoforms of the same protein are often annotated in two different entries if their sequences differ significantly.
Length:708
Mass (Da):81,582
GO
Isoform Small t antigen (identifier: P03081-1) [UniParc]FASTAAdd to basket
The sequence of this isoform can be found in the external entry P03081.
Isoforms of the same protein are often annotated in two different entries if their sequences differ significantly.
Note: Produced by alternative splicing.
Length:174
Mass (Da):20,449
GO
Isoform 17kT antigen (identifier: P03070-2) [UniParc]FASTAAdd to basket
The sequence of this isoform can be found in the external entry P03070.
Isoforms of the same protein are often annotated in two different entries if their sequences differ significantly.
Note: Produced by alternative splicing.
Length:135
Mass (Da):15,754
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
J02400 Genomic DNA. Translation: AAB59919.1.
AJ276576 Genomic DNA. Translation: CAB82890.1.
AJ430321 Genomic DNA. Translation: CAD23041.1.
AJ430322 Genomic DNA. Translation: CAD23042.1.
AJ430323 Genomic DNA. Translation: CAD23043.1.
RefSeqiYP_003708377.1. NC_001669.1. [P0C6L2-1]

Genome annotation databases

GeneIDi29031022.
KEGGivg:29031022.

Keywords - Coding sequence diversityi

Alternative initiation, Alternative splicing

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
J02400 Genomic DNA. Translation: AAB59919.1.
AJ276576 Genomic DNA. Translation: CAB82890.1.
AJ430321 Genomic DNA. Translation: CAD23041.1.
AJ430322 Genomic DNA. Translation: CAD23042.1.
AJ430323 Genomic DNA. Translation: CAD23043.1.
RefSeqiYP_003708377.1. NC_001669.1. [P0C6L2-1]

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi29031022.
KEGGivg:29031022.

Family and domain databases

ProtoNetiSearch...

Entry informationi

Entry nameiSELP_SV40
AccessioniPrimary (citable) accession number: P0C6L2
Secondary accession number(s): Q04240, Q9IVA6
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 25, 2008
Last sequence update: November 25, 2008
Last modified: April 12, 2017
This is version 19 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.