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Protein

Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1

Gene

Svep1

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

May play a role in the cell attachment process.By similarity

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Cell adhesion

Keywords - Ligandi

Calcium

Names & Taxonomyi

Protein namesi
Recommended name:
Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1
Gene namesi
Name:Svep1
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Unplaced

Organism-specific databases

RGDi1588987. Svep1.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm, Membrane, Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1717Sequence analysisAdd
BLAST
Chaini18 – 35643547Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1PRO_0000320180Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi187 – 1871N-linked (GlcNAc...)Sequence analysis
Disulfide bondi379 ↔ 421By similarity
Disulfide bondi407 ↔ 434By similarity
Disulfide bondi439 ↔ 481By similarity
Disulfide bondi467 ↔ 494By similarity
Disulfide bondi499 ↔ 544By similarity
Disulfide bondi530 ↔ 559By similarity
Disulfide bondi727 ↔ 769By similarity
Disulfide bondi753 ↔ 787By similarity
Disulfide bondi1192 ↔ 1203By similarity
Disulfide bondi1197 ↔ 1212By similarity
Disulfide bondi1214 ↔ 1223By similarity
Disulfide bondi1230 ↔ 1241By similarity
Disulfide bondi1235 ↔ 1250By similarity
Disulfide bondi1252 ↔ 1261By similarity
Disulfide bondi1268 ↔ 1279By similarity
Disulfide bondi1273 ↔ 1288By similarity
Disulfide bondi1290 ↔ 1299By similarity
Disulfide bondi1306 ↔ 1317By similarity
Disulfide bondi1311 ↔ 1326By similarity
Disulfide bondi1328 ↔ 1337By similarity
Disulfide bondi1344 ↔ 1355By similarity
Disulfide bondi1349 ↔ 1364By similarity
Disulfide bondi1366 ↔ 1375By similarity
Disulfide bondi1382 ↔ 1393By similarity
Disulfide bondi1387 ↔ 1402By similarity
Disulfide bondi1404 ↔ 1413By similarity
Disulfide bondi1626 ↔ 1667By similarity
Disulfide bondi1653 ↔ 1680By similarity
Disulfide bondi1685 ↔ 1725By similarity
Disulfide bondi1711 ↔ 1738By similarity
Disulfide bondi1744 ↔ 1756By similarity
Disulfide bondi1750 ↔ 1765By similarity
Glycosylationi1760 – 17601N-linked (GlcNAc...)Sequence analysis
Disulfide bondi1767 ↔ 1778By similarity
Disulfide bondi1784 ↔ 1824By similarity
Disulfide bondi1810 ↔ 1837By similarity
Disulfide bondi1842 ↔ 1882By similarity
Disulfide bondi1868 ↔ 1895By similarity
Disulfide bondi1900 ↔ 1940By similarity
Disulfide bondi1926 ↔ 1953By similarity
Disulfide bondi1958 ↔ 1998By similarity
Disulfide bondi1984 ↔ 2011By similarity
Disulfide bondi2016 ↔ 2056By similarity
Disulfide bondi2042 ↔ 2073By similarity
Disulfide bondi2078 ↔ 2121By similarity
Disulfide bondi2107 ↔ 2136By similarity
Disulfide bondi2141 ↔ 2181By similarity
Disulfide bondi2167 ↔ 2194By similarity
Disulfide bondi2199 ↔ 2240By similarity
Disulfide bondi2226 ↔ 2254By similarity
Disulfide bondi2259 ↔ 2299By similarity
Disulfide bondi2285 ↔ 2313By similarity
Disulfide bondi2318 ↔ 2358By similarity
Disulfide bondi2344 ↔ 2371By similarity
Disulfide bondi2376 ↔ 2417By similarity
Disulfide bondi2403 ↔ 2430By similarity
Disulfide bondi2435 ↔ 2475By similarity
Disulfide bondi2461 ↔ 2488By similarity
Disulfide bondi2493 ↔ 2533By similarity
Disulfide bondi2519 ↔ 2546By similarity
Disulfide bondi2551 ↔ 2591By similarity
Disulfide bondi2577 ↔ 2603By similarity
Disulfide bondi2679 ↔ 2706By similarity
Disulfide bondi2711 ↔ 2751By similarity
Disulfide bondi2737 ↔ 2764By similarity
Disulfide bondi2769 ↔ 2809By similarity
Disulfide bondi2795 ↔ 2822By similarity
Disulfide bondi2827 ↔ 2867By similarity
Disulfide bondi2853 ↔ 2880By similarity
Disulfide bondi2885 ↔ 2925By similarity
Disulfide bondi2911 ↔ 2938By similarity
Disulfide bondi2943 ↔ 2983By similarity
Disulfide bondi2969 ↔ 2996By similarity
Disulfide bondi3001 ↔ 3040By similarity
Disulfide bondi3026 ↔ 3052By similarity
Disulfide bondi3057 ↔ 3097By similarity
Disulfide bondi3083 ↔ 3110By similarity
Disulfide bondi3115 ↔ 3156By similarity
Disulfide bondi3141 ↔ 3169By similarity
Disulfide bondi3174 ↔ 3214By similarity
Disulfide bondi3200 ↔ 3229By similarity
Disulfide bondi3234 ↔ 3274By similarity
Disulfide bondi3260 ↔ 3287By similarity
Disulfide bondi3292 ↔ 3332By similarity
Disulfide bondi3318 ↔ 3345By similarity
Disulfide bondi3350 ↔ 3391By similarity
Disulfide bondi3377 ↔ 3404By similarity
Disulfide bondi3409 ↔ 3449By similarity
Disulfide bondi3435 ↔ 3461By similarity
Disulfide bondi3497 ↔ 3507By similarity
Disulfide bondi3501 ↔ 3513By similarity
Disulfide bondi3515 ↔ 3524By similarity
Disulfide bondi3529 ↔ 3539By similarity
Disulfide bondi3533 ↔ 3545By similarity
Disulfide bondi3547 ↔ 3556By similarity

Keywords - PTMi

Disulfide bond, Glycoprotein

Proteomic databases

PaxDbiP0C6B8.
PRIDEiP0C6B8.

Expressioni

Inductioni

Estrogen-dependent; induced upon 17betaE2 treatment in cultured osteoblasts (at protein level).1 Publication

Gene expression databases

BgeeiENSRNOG00000033110.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000050549.

Structurei

3D structure databases

ProteinModelPortaliP0C6B8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini84 – 265182VWFAPROSITE-ProRule annotationAdd
BLAST
Domaini377 – 43660Sushi 1PROSITE-ProRule annotationAdd
BLAST
Domaini437 – 49660Sushi 2PROSITE-ProRule annotationAdd
BLAST
Domaini497 – 56165Sushi 3PROSITE-ProRule annotationAdd
BLAST
Domaini560 – 64485HYR 1PROSITE-ProRule annotationAdd
BLAST
Domaini645 – 72480HYR 2PROSITE-ProRule annotationAdd
BLAST
Domaini725 – 78965Sushi 4PROSITE-ProRule annotationAdd
BLAST
Domaini1188 – 122437EGF-like 1PROSITE-ProRule annotationAdd
BLAST
Domaini1226 – 126237EGF-like 2; calcium-bindingPROSITE-ProRule annotationAdd
BLAST
Domaini1264 – 130037EGF-like 3; calcium-bindingPROSITE-ProRule annotationAdd
BLAST
Domaini1302 – 133837EGF-like 4; calcium-bindingPROSITE-ProRule annotationAdd
BLAST
Domaini1340 – 137637EGF-like 5; calcium-bindingPROSITE-ProRule annotationAdd
BLAST
Domaini1378 – 141437EGF-like 6; calcium-bindingPROSITE-ProRule annotationAdd
BLAST
Domaini1425 – 1618194PentaxinAdd
BLAST
Domaini1624 – 168259Sushi 5PROSITE-ProRule annotationAdd
BLAST
Domaini1683 – 174058Sushi 6PROSITE-ProRule annotationAdd
BLAST
Domaini1740 – 177940EGF-like 7; calcium-bindingPROSITE-ProRule annotationAdd
BLAST
Domaini1776 – 183964Sushi 7PROSITE-ProRule annotationAdd
BLAST
Domaini1840 – 189758Sushi 8PROSITE-ProRule annotationAdd
BLAST
Domaini1898 – 195558Sushi 9PROSITE-ProRule annotationAdd
BLAST
Domaini1956 – 201358Sushi 10PROSITE-ProRule annotationAdd
BLAST
Domaini2014 – 207562Sushi 11PROSITE-ProRule annotationAdd
BLAST
Domaini2076 – 213863Sushi 12PROSITE-ProRule annotationAdd
BLAST
Domaini2139 – 219658Sushi 13PROSITE-ProRule annotationAdd
BLAST
Domaini2197 – 225660Sushi 14PROSITE-ProRule annotationAdd
BLAST
Domaini2257 – 231559Sushi 15PROSITE-ProRule annotationAdd
BLAST
Domaini2316 – 237358Sushi 16PROSITE-ProRule annotationAdd
BLAST
Domaini2374 – 243259Sushi 17PROSITE-ProRule annotationAdd
BLAST
Domaini2433 – 249058Sushi 18PROSITE-ProRule annotationAdd
BLAST
Domaini2491 – 254858Sushi 19PROSITE-ProRule annotationAdd
BLAST
Domaini2549 – 260557Sushi 20PROSITE-ProRule annotationAdd
BLAST
Domaini2659 – 270850Sushi 21PROSITE-ProRule annotationAdd
BLAST
Domaini2709 – 276658Sushi 22PROSITE-ProRule annotationAdd
BLAST
Domaini2767 – 282458Sushi 23PROSITE-ProRule annotationAdd
BLAST
Domaini2825 – 288258Sushi 24PROSITE-ProRule annotationAdd
BLAST
Domaini2883 – 294058Sushi 25PROSITE-ProRule annotationAdd
BLAST
Domaini2941 – 299858Sushi 26PROSITE-ProRule annotationAdd
BLAST
Domaini2999 – 305456Sushi 27PROSITE-ProRule annotationAdd
BLAST
Domaini3055 – 311258Sushi 28PROSITE-ProRule annotationAdd
BLAST
Domaini3113 – 317159Sushi 29PROSITE-ProRule annotationAdd
BLAST
Domaini3172 – 323160Sushi 30PROSITE-ProRule annotationAdd
BLAST
Domaini3232 – 328958Sushi 31PROSITE-ProRule annotationAdd
BLAST
Domaini3290 – 334758Sushi 32PROSITE-ProRule annotationAdd
BLAST
Domaini3348 – 340659Sushi 33PROSITE-ProRule annotationAdd
BLAST
Domaini3407 – 346357Sushi 34PROSITE-ProRule annotationAdd
BLAST
Domaini3493 – 352533EGF-like 8PROSITE-ProRule annotationAdd
BLAST
Domaini3526 – 355732EGF-like 9PROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 9 EGF-like domains.PROSITE-ProRule annotation
Contains 2 HYR domains.PROSITE-ProRule annotation
Contains 1 pentaxin domain.Curated
Contains 34 Sushi (CCP/SCR) domains.PROSITE-ProRule annotation
Contains 1 VWFA domain.PROSITE-ProRule annotation

Keywords - Domaini

EGF-like domain, Repeat, Signal

Phylogenomic databases

eggNOGiKOG1217. Eukaryota.
KOG4297. Eukaryota.
ENOG410XPJ1. LUCA.
HOGENOMiHOG000154457.
HOVERGENiHBG108523.
InParanoidiP0C6B8.
PhylomeDBiP0C6B8.

Family and domain databases

Gene3Di2.40.155.10. 1 hit.
2.60.120.200. 1 hit.
3.40.50.410. 1 hit.
InterProiIPR013320. ConA-like_dom.
IPR001881. EGF-like_Ca-bd_dom.
IPR013032. EGF-like_CS.
IPR000742. EGF-like_dom.
IPR000152. EGF-type_Asp/Asn_hydroxyl_site.
IPR018097. EGF_Ca-bd_CS.
IPR023413. GFP-like.
IPR009030. Growth_fac_rcpt_.
IPR003410. HYR_dom.
IPR001759. Pentaxin-related.
IPR000436. Sushi_SCR_CCP_dom.
IPR011641. Tyr-kin_ephrin_A/B_rcpt-like.
IPR002035. VWF_A.
[Graphical view]
PfamiPF00008. EGF. 6 hits.
PF07645. EGF_CA. 2 hits.
PF07699. Ephrin_rec_like. 4 hits.
PF02494. HYR. 2 hits.
PF00354. Pentaxin. 1 hit.
PF00084. Sushi. 32 hits.
PF00092. VWA. 1 hit.
[Graphical view]
PRINTSiPR00895. PENTAXIN.
SMARTiSM00032. CCP. 34 hits.
SM00181. EGF. 11 hits.
SM00179. EGF_CA. 8 hits.
SM01411. Ephrin_rec_like. 4 hits.
SM00159. PTX. 1 hit.
SM00327. VWA. 1 hit.
[Graphical view]
SUPFAMiSSF49899. SSF49899. 1 hit.
SSF53300. SSF53300. 1 hit.
SSF57184. SSF57184. 3 hits.
SSF57535. SSF57535. 33 hits.
PROSITEiPS00010. ASX_HYDROXYL. 6 hits.
PS00022. EGF_1. 9 hits.
PS01186. EGF_2. 11 hits.
PS50026. EGF_3. 9 hits.
PS01187. EGF_CA. 6 hits.
PS50825. HYR. 2 hits.
PS50923. SUSHI. 34 hits.
PS50234. VWFA. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P0C6B8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MWTRLAFCCW ALALVSGWTN FQPMAPSLNF SFRLFPEASP GALGRLAVPP
60 70 80 90 100
RSGEEEAVGS KVERLGRTFR SRVRRLRELS DRLELVFLVD ESSSVGQTNF
110 120 130 140 150
LNELKFVRKL LSDFPVVSTA TRVAIVTFSS KNNVVARVDY ISTSRAHQHK
160 170 180 190 200
CALLSREIPA ITYRGGGTYT MGAFQQAAQI LRHSRENSTK VIFLITDGYS
210 220 230 240 250
NGGDPRPIAA SLRDFGVEIF TFGIWQGNIR ELNDMASTPK EEHCYLLHSF
260 270 280 290 300
EEFEALARRA LHEDLPSGSF IQEDMAHCSY LCEAGRDCCD RMASCKCGTH
310 320 330 340 350
TGQFECICEK GYYGKGLQYE CTACPPGTYK PEASPGGIST CIPCPDENHT
360 370 380 390 400
SPPGSTAPED CVCREGYQRS GQTCEVVHCP ALKPPENGFF IQNTCKNHFN
410 420 430 440 450
AACGVRCRPG FDLVGSSIHL CQPNGLWSGT ESFCRVRTCP HLRQPKHGHI
460 470 480 490 500
SCSTVEMSYN TVCLVTCNEG YRLEGHAKLT CQGNAQWDGT EPRCVERHCA
510 520 530 540 550
TFQKPKGVII SPPSCGKQPA KPGMICQLGC RQGYILSGIR EVRCATSGKW
560 570 580 590 600
SARVQTAVCK DVEAPQISCP NDIKAKTEGQ QDSANVTWQV PTAKDNSGEK
610 620 630 640 650
VSVHVHPAFS PPYLFPIGEV AITYTATDSS GNQASCTFYI KVIDVEPPVI
660 670 680 690 700
DWCRSPPPIQ VVEKEHPASW DEPQFSDNSG AELVITSSHT QGDLFPHGET
710 720 730 740 750
VVWYTATDPS GNNRTCDIHI VIKGSPCEVP FTPVNGDFIC AQDSAGVNCS
760 770 780 790 800
LTCREGYDFT EGSTEKYYCA FEDGIWRPPY STEWPDCAIK RFANHGFKSF
810 820 830 840 850
EMLYKTTRCD DMDLFKKFSA AFETTLGKMV PSFCSDADDI DCRLEDLTKK
860 870 880 890 900
YCIEYNYNYE NGFAIGPGGW GAGNRLDYSY DHFLDVVQET PADVGKTRSS
910 920 930 940 950
RIKRTVPLSD PQIQLIFNIT ASVPLPEERN DTVELENQQR LIRTLETITN
960 970 980 990 1000
RLKSTLNKGP MYSFQLASET VVADSNSLET EKAFLFCRPG SVLRGRMCVN
1010 1020 1030 1040 1050
CPLGTSYSLE HSTCESCLMG SYQDEEGQLE CKLCPPRTHT EYLHSRSISE
1060 1070 1080 1090 1100
CKAQCKQGTY SSSGLETCES CPLGTYQPDF GSRSCLPCPE TTTTVKRGAV
1110 1120 1130 1140 1150
DISACGVPCP VGEFSRSGLT PCYPCPRDYY QPNAGKSFCL ACPFYGTTTI
1160 1170 1180 1190 1200
TGATSITDCS SFSSTFSAAE ESIVPLAAPG PTQNKYEVFH ECFLNPCHNS
1210 1220 1230 1240 1250
GTCQQLGRGY VCLCPPGYTG LKCETDIDEC SSLPCLNGGI CRDKVGGFTC
1260 1270 1280 1290 1300
ECSSGYTGQI CEENINECSS SPCLNKGTCT DGLASYRCTC VSGYVGVHCE
1310 1320 1330 1340 1350
TDVNECQSSP CLNNAVCKDQ VGGFSCKCPP GFLGTRCEKN VDECLSQPCQ
1360 1370 1380 1390 1400
NGATCKDGAN SFRCQCPAGF TGPHCELNIN ECQSNPCRNQ ATCVDELNSY
1410 1420 1430 1440 1450
SCKCRPGFSG RRCETEQPSG FNLDFEVSGI YGYVLLDGVL PTLHAITCAF
1460 1470 1480 1490 1500
WMKSSDVINY GTPISYALEG NKDNTFLLTD YNGWVLYVNG KEKITNCPSV
1510 1520 1530 1540 1550
NDGIWHHIAI TWTSTGGAWR VYIDGELSDS GTGLSVGKAI PGGGALVLGQ
1560 1570 1580 1590 1600
EQDKKGEGFN PAESFVGSIS QLNLWDYVLS PQQVKSLASS CPEELSRGNV
1610 1620 1630 1640 1650
LAWPDFVSGI TGKVKVDSSS IFCSDCPSLE GSVPHLRPAS GDRKPGSKVS
1660 1670 1680 1690 1700
LFCDPGFQMV GNPVQYCLNQ GQWSQPLPHC ERIRCGLPPT LENGFYSAED
1710 1720 1730 1740 1750
LHAGSTVTYQ CTSGYYLLGD SRMFCTDNGS WNGISPSCLD VDECAVGSDC
1760 1770 1780 1790 1800
SEHASCLNTN GSYICSCKPP YTGDGKNCAE PVKCKAPENP ENGHSLGKIY
1810 1820 1830 1840 1850
SVGAEVTFSC EEGHQLVGVR KITCLESGEW DHLRPSCEAI SCGAPPVPEN
1860 1870 1880 1890 1900
GGVDGSAFTY GSKVRYRCDK GYTLAGDEES ACLASGSWSH SSPVCELVKC
1910 1920 1930 1940 1950
SQPENINNGK YILSGLTYLS IASYSCEDGY SLQGPSLIEC TASGSWDRAP
1960 1970 1980 1990 2000
PSCQLVSCGE PPMVKDALTT GSNFTFGNMV TYTCKEGYTL AGPDTIICQA
2010 2020 2030 2040 2050
NGKWNSSNHQ CLAVSCDEPP NVDHASPETA HRLFGDTAFY YCADGYSLAD
2060 2070 2080 2090 2100
NSQLICNAQG NWVPPEGQAV PRCIAHFCEK PPSVSYSILE SVSKAKFAAG
2110 2120 2130 2140 2150
SVVSFKCMEG FVLNTSAKIE CLRGGQWSPS PLSVQCIPVR CGEPPSITNG
2160 2170 2180 2190 2200
YPSGTNYSFG AVVAYSCHKG FYIKGEKKST CEATGQWSRP LPTCHPVSCN
2210 2220 2230 2240 2250
EPPKVENGFL EHTTGRTFES EARFQCNPGY KAVGSPVFVC QANRHWHSDA
2260 2270 2280 2290 2300
PLSCTPLNCG KPPPIQNGFL RGESFEVGSK VQFVCNEGYE LVGDNSWTCQ
2310 2320 2330 2340 2350
KSGKWSKKPS PKCVPTKCAE PPLLENQLVL KELTSEVGVM TISCKEGHAL
2360 2370 2380 2390 2400
QGPSVLKCLP SGQWNGSFPV CKLVLCQSPP LIPFGVPASS GALHFGSTVK
2410 2420 2430 2440 2450
YLCVDGFFLR GNPIILCQVD GTWSSPLPEC VPVECPQPEE ILNGIIHVQG
2460 2470 2480 2490 2500
LAYLSTTLYT CKPGFELVGN TTTLCGENGQ WLGGKPMCRP IECPEPKEIL
2510 2520 2530 2540 2550
NGQFSSVSFQ YGQTITYSCD RGFRLEGPKS LTCLETGNWD MDAPSCNAIH
2560 2570 2580 2590 2600
CSDPQPIENG FVEGADYRYG AMIIYSCFPG FQVVGHAMQT CEETGWSSSS
2610 2620 2630 2640 2650
PTCVPIDCGL PPHIDFGDCT RVSDGQGYFV QEDDMMEVPY LTPHPQHLEA
2660 2670 2680 2690 2700
TAKASEITEE SLVPHASQFL YGTTVSYRCE PGYELLGIPV LVCQEDGTWN
2710 2720 2730 2740 2750
GTAPSCISIE CDLPVAPENG FLHFTQTTMG SAAQYSCKPG HVLEGSHLRL
2760 2770 2780 2790 2800
CLQNKQWSGT VPRCEVISCS EPNPLGNGSI KGNDYSYLGV LHYECDSGYV
2810 2820 2830 2840 2850
LNGTEKRTCQ ENKQWDGHEP VCLPVDCGSP PVPTNGQVTG EEYTFQKEIA
2860 2870 2880 2890 2900
YSCGEGFILE GARSRVCLTN GSWSGTTPSC VPVRCPAPPQ VANGVTDGLD
2910 2920 2930 2940 2950
YGFKKEVTFH CLEGYVLQGT PKLTCQSNGT WDAEVPICKP ATCGPPADLP
2960 2970 2980 2990 3000
QGFPNGFSFF HGGHIQYQCF TGYKLHGNPS RRCLPDGSWS GSTPSCLPCT
3010 3020 3030 3040 3050
CSTPIIQQGT VNATDLGCGK TVQIECFKGF KLLGLPEITC DANGQWSDFP
3060 3070 3080 3090 3100
LCEHADCGPL PTVPNGIVIK GSPSEDNVVT YSCRPGYIIQ GSSDLICTEK
3110 3120 3130 3140 3150
GIWSEPYPTC EPVSCGPPPT VANAVATGEA HTYESKVKLR CLEGYVVDTD
3160 3170 3180 3190 3200
TDTFTCQQDG RWFPERINCS PKTCPVPSNR TRIRVHGDDF QVNRQVSVSC
3210 3220 3230 3240 3250
TEGFTYDGAD RSTCQPDGTW EPPLSEESCI PVVCGQPESP EHGFVVGSEY
3260 3270 3280 3290 3300
SFGSTVVYQC DPGYELEGNR ERVCQENRQW SGRVAVCRES RCEAPAEFPN
3310 3320 3330 3340 3350
GKAVLENTTS GPSLLFSCHR GYTLEGPPEA HCTANGTWSH LAPLCKPNPC
3360 3370 3380 3390 3400
PVPFVIPENA LLSEREFYVN QNVSIKCREG FLLKGNGIIT CNPDETWTQT
3410 3420 3430 3440 3450
NARCEKISCG PPTHVENAIA RGVHYQYGDM VTFSCYSGYM LEGSLRSVCL
3460 3470 3480 3490 3500
ENGTWTPPPI CRAVCRFPCQ NGGVCQRPNA CSCPDGWMGR LCEEPICILP
3510 3520 3530 3540 3550
CLNGGRCVAP YRCDCPAGWT GSRCHTATCQ SPCLNGGKCV RPNRCHCLSS
3560
WTGHDCSRKR RSGL
Length:3,564
Mass (Da):387,355
Last modified:February 26, 2008 - v1
Checksum:iBA1A3F013BEE2A31
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR03040659 Genomic DNA. No translation available.
AABR03041327 Genomic DNA. No translation available.
AABR03041522 Genomic DNA. No translation available.
AABR03042206 Genomic DNA. No translation available.
AABR03044351 Genomic DNA. No translation available.
AABR03044745 Genomic DNA. No translation available.
AABR03045322 Genomic DNA. No translation available.

Genome annotation databases

UCSCiRGD:1588987. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR03040659 Genomic DNA. No translation available.
AABR03041327 Genomic DNA. No translation available.
AABR03041522 Genomic DNA. No translation available.
AABR03042206 Genomic DNA. No translation available.
AABR03044351 Genomic DNA. No translation available.
AABR03044745 Genomic DNA. No translation available.
AABR03045322 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortaliP0C6B8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000050549.

Proteomic databases

PaxDbiP0C6B8.
PRIDEiP0C6B8.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

UCSCiRGD:1588987. rat.

Organism-specific databases

RGDi1588987. Svep1.

Phylogenomic databases

eggNOGiKOG1217. Eukaryota.
KOG4297. Eukaryota.
ENOG410XPJ1. LUCA.
HOGENOMiHOG000154457.
HOVERGENiHBG108523.
InParanoidiP0C6B8.
PhylomeDBiP0C6B8.

Miscellaneous databases

PROiP0C6B8.

Gene expression databases

BgeeiENSRNOG00000033110.

Family and domain databases

Gene3Di2.40.155.10. 1 hit.
2.60.120.200. 1 hit.
3.40.50.410. 1 hit.
InterProiIPR013320. ConA-like_dom.
IPR001881. EGF-like_Ca-bd_dom.
IPR013032. EGF-like_CS.
IPR000742. EGF-like_dom.
IPR000152. EGF-type_Asp/Asn_hydroxyl_site.
IPR018097. EGF_Ca-bd_CS.
IPR023413. GFP-like.
IPR009030. Growth_fac_rcpt_.
IPR003410. HYR_dom.
IPR001759. Pentaxin-related.
IPR000436. Sushi_SCR_CCP_dom.
IPR011641. Tyr-kin_ephrin_A/B_rcpt-like.
IPR002035. VWF_A.
[Graphical view]
PfamiPF00008. EGF. 6 hits.
PF07645. EGF_CA. 2 hits.
PF07699. Ephrin_rec_like. 4 hits.
PF02494. HYR. 2 hits.
PF00354. Pentaxin. 1 hit.
PF00084. Sushi. 32 hits.
PF00092. VWA. 1 hit.
[Graphical view]
PRINTSiPR00895. PENTAXIN.
SMARTiSM00032. CCP. 34 hits.
SM00181. EGF. 11 hits.
SM00179. EGF_CA. 8 hits.
SM01411. Ephrin_rec_like. 4 hits.
SM00159. PTX. 1 hit.
SM00327. VWA. 1 hit.
[Graphical view]
SUPFAMiSSF49899. SSF49899. 1 hit.
SSF53300. SSF53300. 1 hit.
SSF57184. SSF57184. 3 hits.
SSF57535. SSF57535. 33 hits.
PROSITEiPS00010. ASX_HYDROXYL. 6 hits.
PS00022. EGF_1. 9 hits.
PS01186. EGF_2. 11 hits.
PS50026. EGF_3. 9 hits.
PS01187. EGF_CA. 6 hits.
PS50825. HYR. 2 hits.
PS50923. SUSHI. 34 hits.
PS50234. VWFA. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiSVEP1_RAT
AccessioniPrimary (citable) accession number: P0C6B8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 26, 2008
Last sequence update: February 26, 2008
Last modified: September 7, 2016
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.