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Protein

Putative UPF0479 protein YHL050W-A

Gene

YHL050W-A

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein uncertaini

Names & Taxonomyi

Protein namesi
Recommended name:
Putative UPF0479 protein YHL050W-A
Gene namesi
Ordered Locus Names:YHL050W-A
OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Taxonomic identifieri559292 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
ProteomesiUP000002311: Chromosome VIII

Organism-specific databases

SGDiS000028644. YHL050W-A.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei39 – 5921HelicalSequence AnalysisAdd
BLAST
Transmembranei136 – 15621HelicalSequence AnalysisAdd
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 160160Putative UPF0479 protein YHL050W-APRO_0000299785Add
BLAST

Expressioni

Gene expression databases

GenevestigatoriP0C5B8.

Interactioni

Protein-protein interaction databases

STRINGi4932.YHL050W-A.

Structurei

3D structure databases

ProteinModelPortaliP0C5B8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi103 – 1064Poly-Ser

Sequence similaritiesi

Belongs to the UPF0479 family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

GeneTreeiENSGT00730000111607.
HOGENOMiHOG000000847.
OrthoDBiEOG7BKD6G.

Sequencei

Sequence statusi: Complete.

P0C5B8-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MMPAKLQLDV LRTLQSSARH GTQTLKNSNF LERFHKDRIV FCLPFFLALF
60 70 80 90 100
LVPVQKVLQH LCLRFTQVAP YFIIQLFDLP SRHAENLAPL LASCRIQYTN
110 120 130 140 150
CFSSSSNGQV PSIISLYLRV DLSPFYAKKF QIPYRVPMIW LDVFQVFFVF
160
LVISQHSLHS
Length:160
Mass (Da):18,609
Last modified:September 11, 2007 - v1
Checksum:iFD869ABB41E8F01E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U11583 Genomic DNA. No translation available.
AF479994 Genomic DNA. Translation: AAL79307.1.
BK006934 Genomic DNA. No translation available.

Genome annotation databases

EnsemblFungiiYHL050W-A; YHL050W-A; YHL050W-A.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U11583 Genomic DNA. No translation available.
AF479994 Genomic DNA. Translation: AAL79307.1.
BK006934 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortaliP0C5B8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi4932.YHL050W-A.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiYHL050W-A; YHL050W-A; YHL050W-A.

Organism-specific databases

SGDiS000028644. YHL050W-A.

Phylogenomic databases

GeneTreeiENSGT00730000111607.
HOGENOMiHOG000000847.
OrthoDBiEOG7BKD6G.

Gene expression databases

GenevestigatoriP0C5B8.

Family and domain databases

ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 204508 / S288c.
  2. Cited for: GENOME REANNOTATION.
    Strain: ATCC 204508 / S288c.
  3. Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].

Entry informationi

Entry nameiYH050_YEAST
AccessioniPrimary (citable) accession number: P0C5B8
Secondary accession number(s): Q8TGK2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 11, 2007
Last sequence update: September 11, 2007
Last modified: January 7, 2015
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Caution

Product of a dubious gene prediction. Completely overlaps YHL050C.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries
  3. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  4. Yeast chromosome VIII
    Yeast (Saccharomyces cerevisiae) chromosome VIII: entries and gene names

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.