P0C518 (ATP9_ORYSI) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
ATP synthase subunit 9, mitochondrial

Alternative name(s):
Lipid-binding protein

Gene names

Name:

ATP9

Encoded on

Mitochondrion

Organism

Oryza sativa subsp. indica (Rice)

Taxonomic identifier

39946 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › BEP clade › Ehrhartoideae › Oryzeae › Oryza

Protein attributes

Sequence length	74 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	This protein is one of the chains of the nonenzymatic membrane component (F0) of mitochondrial ATPase.
Subunit structure	F-type ATPases have 2 components, CF1 - the catalytic core - and CF0 - the membrane proton channel. CF1 has five subunits: alpha3, beta3, gamma1, delta1, epsilon1. CF0 has three main subunits: a, b and c.
Subcellular location	Mitochondrion membrane; Multi-pass membrane protein Potential.
Sequence similarities	Belongs to the ATPase C chain family.
Caution	The first citation (Ref.1) originated from Petunia.
RNA editing	Edited at positions 7, 20, 28, 31, 64, 71 and 75. The stop codon at position 75 is created by RNA editing By similarity.

Ontologies

Keywords
Biological process	Hydrogen ion transport Ion transport Transport
Cellular component	CF(0) Membrane Mitochondrion
Coding sequence diversity	RNA editing
Domain	Transmembrane Transmembrane helix
Ligand	ATP-binding Lipid-binding Nucleotide-binding
Gene Ontology (GO)
Biological process	ATP hydrolysis coupled proton transport Inferred from electronic annotation. Source: InterPro ATP synthesis coupled proton transport Inferred from electronic annotation. Source: InterPro
Cellular component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW mitochondrial membrane Inferred from electronic annotation. Source: UniProtKB-SubCell proton-transporting ATP synthase complex, coupling factor F(o) Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW hydrogen ion transmembrane transporter activity Inferred from electronic annotation. Source: InterPro lipid binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 74	74	ATP synthase subunit 9, mitochondrial		PRO_0000112218
Regions
	Transmembrane	8 – 28	21	Helical; Potential
	Transmembrane	53 – 73	21	Helical; Potential
Sites
	Site	57	1	Reversibly protonated during proton transport By similarity

Sequences

	Sequence		Length	Mass (Da)
	P0C518 [UniParc]. Last modified June 12, 2007. Version 1. Checksum: CA932F847058F5E3	FASTA	74	7,557
	10 20 30 40 50 60 MLEGAKLIGA GAATIALAGA AVGIGNVFSS LIHSVARNPS LAKQLFGYAI LGFALTEAIA 70 LFALMMAFLI LFVF

References

[1]	"Nucleotide sequences of mitochondrial ATPase subunit 9 genes from three lines of rice (Oryza sativa L.)." Xie Y., Wu R. Nucleic Acids Res. 18:4268-4268(1990) [PubMed: 2143016] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA]. Strain: cv. Zhenshan 97A.
[2]	Erratum Wu R. Nucleic Acids Res. 18:6194-6194(1990) [PubMed: 2235528] [Abstract] Cited for: RETRACTION.
[3]	"Sequence of the F0-ATPase proteolipid (atp9) gene from rice mitochondria." Kaleikau E.K., Andre C.P., Walbot V. Nucleic Acids Res. 18:370-370(1990) [PubMed: 2139209] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. Strain: cv. IR36.

Cross-references

Sequence databases
EMBL GenBank DDBJ	X16936 Genomic DNA. Translation: CAA34810.1.
PIR	LWRZM. JQ0563.
3D structure databases
ProteinModelPortal	P0C518.
ModBase	Search...
Proteomic databases
PRIDE	P0C518.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Organism-specific databases
Gramene	P14863.
Family and domain databases
InterPro	IPR000454. ATPase_F0-cplx_csu. IPR020537. ATPase_F0-cplx_csu_DDCD_BS. IPR002379. ATPase_F0/V0-cplx_csu. [Graphical view]
Gene3D	G3DSA:1.20.20.10. ATPase_F0/V0_c. 1 hit.
Pfam	PF00137. ATP-synt_C. 1 hit. [Graphical view]
PRINTS	PR00124. ATPASEC.
SUPFAM	SSF81333. ATPase_F0/V0_c. 1 hit.
PROSITE	PS00605. ATPASE_C. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

ATP9_ORYSI

Accession

Primary (citable) accession number: P0C518
Secondary accession number(s): P14863, Q7JAI7

Entry history

Integrated into UniProtKB/Swiss-Prot:	June 12, 2007
Last sequence update:	June 12, 2007
Last modified:	January 25, 2012
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Plant Protein Annotation Program