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Protein

NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic

Gene

ndhF

Organism
Oryza sativa (Rice)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient (By similarity).By similarity

Catalytic activityi

NAD(P)H + plastoquinone = NAD(P)+ + plastoquinol.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionOxidoreductase
Biological processTransport
LigandNAD, NADP, Plastoquinone

Names & Taxonomyi

Protein namesi
Recommended name:
NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic (EC:1.6.5.-)
Alternative name(s):
NAD(P)H dehydrogenase subunit 5
NADH-plastoquinone oxidoreductase subunit 5
Gene namesi
Name:ndhF
ORF Names:PA165
Encoded oniPlastid; Chloroplast
OrganismiOryza sativa (Rice)
Taxonomic identifieri4530 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei9 – 29HelicalSequence analysisAdd BLAST21
Transmembranei39 – 59HelicalSequence analysisAdd BLAST21
Transmembranei89 – 109HelicalSequence analysisAdd BLAST21
Transmembranei125 – 145HelicalSequence analysisAdd BLAST21
Transmembranei147 – 167HelicalSequence analysisAdd BLAST21
Transmembranei185 – 205HelicalSequence analysisAdd BLAST21
Transmembranei224 – 244HelicalSequence analysisAdd BLAST21
Transmembranei258 – 278HelicalSequence analysisAdd BLAST21
Transmembranei280 – 300HelicalSequence analysisAdd BLAST21
Transmembranei327 – 347HelicalSequence analysisAdd BLAST21
Transmembranei354 – 374HelicalSequence analysisAdd BLAST21
Transmembranei396 – 416HelicalSequence analysisAdd BLAST21
Transmembranei425 – 445HelicalSequence analysisAdd BLAST21
Transmembranei542 – 562HelicalSequence analysisAdd BLAST21
Transmembranei605 – 625HelicalSequence analysisAdd BLAST21
Transmembranei714 – 734HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

  • chloroplast thylakoid membrane Source: UniProtKB-SubCell
  • integral component of membrane Source: UniProtKB-KW
  • plastid Source: Gramene

Keywords - Cellular componenti

Chloroplast, Membrane, Plastid, Thylakoid

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001181981 – 734NAD(P)H-quinone oxidoreductase subunit 5, chloroplasticAdd BLAST734

Keywords - PTMi

Quinone

Interactioni

Subunit structurei

NDH is composed of at least 16 different subunits, 5 of which are encoded in the nucleus.By similarity

Family & Domainsi

Sequence similaritiesi

Belongs to the complex I subunit 5 family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG4668. Eukaryota.
COG1009. LUCA.
HOGENOMiHOG000100569.

Family and domain databases

InterProiView protein in InterPro
IPR002128. NADH_UbQ_OxRdtase_chlpt_su5_C.
IPR003945. NADHpl_OxRdtase_5.
IPR018393. NADHpl_OxRdtase_5_subgr.
IPR001750. ND/Mrp_mem.
IPR001516. Proton_antipo_N.
PfamiView protein in Pfam
PF01010. Proton_antipo_C. 1 hit.
PF00361. Proton_antipo_M. 1 hit.
PF00662. Proton_antipo_N. 1 hit.
PRINTSiPR01435. NPOXDRDTASE5.
TIGRFAMsiTIGR01974. NDH_I_L. 1 hit.

Sequencei

Sequence statusi: Complete.

P0C326-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEHTYQYAWV IPLLPLPVIM SMGFGLFLVP TATKNLRRIW AFPSVLLLSI
60 70 80 90 100
AMVFSVHLSI QQINGSSIYQ YLWSWTVNND FSLEFGYLID PLTSIMLILI
110 120 130 140 150
TTVGILVLIY SDDYMSHDEG YLRFFVYISF FNTSMLGLVT SSNLIQIYFF
160 170 180 190 200
WELVGMCSYL LIGFWFTRPI AASACQKAFV TNRVGDFGLL LGILGFFWIT
210 220 230 240 250
GSLEFRDLFK IANNWIPNNE INSLLTILCA FLLFLGAVAK SAQFPLHVWL
260 270 280 290 300
PDAMEGPTPI SALIHAATMV AAGIFLIARL LPLFISLPLI MSFISLIGTL
310 320 330 340 350
TLFLGATLAL AQRDIKRSLA YSTMSQLGYM MLALGIGSYQ AALFHLITHA
360 370 380 390 400
YSKALLFLGS GSVIHSMEPL VGYSPDKSQN MVLMGGLRKY IPITRTCFLW
410 420 430 440 450
GTLSLCGIPP LACFWSKDEI LSNSWLYSPF FGIIASFTAG LTAFYMFRIY
460 470 480 490 500
LLTFDGYLRV HFQNYSSTKE DSLYSISLWG KRISKGVNRD FVLSTAKSGV
510 520 530 540 550
SFFSQNLSKI HVNTGNRIGS FSTSLGTKNT FVYPHEPGNT MLFPLLILLL
560 570 580 590 600
CTLFIGSIGI HFDNEIGELT ILSKWLTPSI NFFQESSNSS INSYEFITNA
610 620 630 640 650
ISSVSLAIFG LFIAYMFYGS AYSFFQNLDL INSFVKGGPK KYFFHQLKKK
660 670 680 690 700
IYSWSYNRGY IDIFYTRTFT LGIRGLTELT QFFDKGVIDG ITNGVGLASF
710 720 730
CIGEEIKYVG GGRISSYLFF FLCYVSVFLF FFLS
Length:734
Mass (Da):82,527
Last modified:May 29, 2007 - v1
Checksum:i4B308BD933E9608C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY522331 Genomic DNA. Translation: AAS46217.1.
RefSeqiYP_009305359.1. NC_031333.1.

Genome annotation databases

GeneIDi29141434.

Similar proteinsi

Entry informationi

Entry nameiNU5C_ORYSA
AccessioniPrimary (citable) accession number: P0C326
Secondary accession number(s): P12129, Q6QXX7, Q6QY40
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 29, 2007
Last sequence update: May 29, 2007
Last modified: July 5, 2017
This is version 42 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families