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P0C2X3 (C_VSIVC) Reviewed, UniProtKB/Swiss-Prot

Last modified April 3, 2013. Version 5. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length67 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

May play a role in viral pathogenesis or transmission by insects vectors.

Miscellaneous

The P gene has two overlapping open reading frames. One encodes the P protein and the other the C'/C proteins.

Sequence similarities

Belongs to the rhabdoviruses C protein family.

Ontologies

Keywords
   Coding sequence diversityAlternative initiation
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Alternative products

This entry describes 2 isoforms produced by alternative initiation. [Align] [Select]
Isoform C' (identifier: P0C2X3-1)

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.
Isoform C (identifier: P0C2X3-2)

The sequence of this isoform differs from the canonical sequence as follows:
     1-12: Missing.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 6767Protein C'
PRO_0000288652

Natural variations

Alternative sequence1 – 1212Missing in isoform C.
VSP_025745

Sequences

Sequence LengthMass (Da)Tools
Isoform C' [UniParc].

Last modified May 29, 2007. Version 1.
Checksum: DDA36356842833BE

FASTA678,017
        10         20         30         40         50         60 
MRLKHNGRKS PIMNCSKRTD RKSILSPLIF RQQMILIQNL NQKLKTIKAC LYQTWKLSRL 


KALYRSL

« Hide

Isoform C [UniParc].

Checksum: EC96A274610BDA26
Show »

FASTA556,598

References

[1]"Full-length genome analysis of natural isolates of vesicular stomatitis virus (Indiana 1 serotype) from North, Central and South America."
Rodriguez L.L., Pauszek S.J., Bunch T.A., Schumann K.R.
J. Gen. Virol. 83:2475-2483(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC RNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AF473866 Genomic RNA. No translation available.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

ProtoNetSearch...

Entry information

Entry nameC_VSIVC
AccessionPrimary (citable) accession number: P0C2X3
Entry history
Integrated into UniProtKB/Swiss-Prot: May 29, 2007
Last sequence update: May 29, 2007
Last modified: April 3, 2013
This is version 5 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programViral Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

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