Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

39S ribosomal protein L30, mitochondrial

Gene

Mrpl30

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-RNO-5389840. Mitochondrial translation elongation.
R-RNO-5419276. Mitochondrial translation termination.

Names & Taxonomyi

Protein namesi
Recommended name:
39S ribosomal protein L30, mitochondrial
Short name:
L30mt
Short name:
MRP-L30
Gene namesi
Name:Mrpl30
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 9

Organism-specific databases

RGDi1308196. Mrpl30.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transit peptidei1 – 34Mitochondrion1 PublicationAdd BLAST34
ChainiPRO_000027324035 – 16039S ribosomal protein L30, mitochondrialAdd BLAST126

Proteomic databases

PaxDbiP0C2C1.

Expressioni

Gene expression databases

BgeeiENSRNOG00000049330.
ExpressionAtlasiP0C2C1. baseline.
GenevisibleiP0C2C1. RN.

Interactioni

Subunit structurei

Component of the mitochondrial ribosome large subunit (39S) which comprises a 16S rRNA and about 50 distinct proteins.By similarity

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000067807.

Structurei

3D structure databases

ProteinModelPortaliP0C2C1.
SMRiP0C2C1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiKOG4799. Eukaryota.
ENOG4111TYH. LUCA.
GeneTreeiENSGT00390000016769.
HOGENOMiHOG000072705.
HOVERGENiHBG082601.
InParanoidiP0C2C1.
KOiK02907.
OMAiNMSNTCL.
OrthoDBiEOG091G0LCK.
PhylomeDBiP0C2C1.
TreeFamiTF314611.

Family and domain databases

CDDicd01658. Ribosomal_L30. 1 hit.
Gene3Di3.30.1390.20. 1 hit.
InterProiView protein in InterPro
IPR036919. L30_ferredoxin-like_sf.
IPR005996. Ribosomal_L30_bac-type.
IPR016082. Ribosomal_L30_ferredoxin-like.
PANTHERiPTHR15892. PTHR15892. 1 hit.
PfamiView protein in Pfam
PF00327. Ribosomal_L30. 1 hit.
SUPFAMiSSF55129. SSF55129. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P0C2C1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAGVLRSVFQ RPPGRLQTVK KGAESLIGTE WIRHKFTRSR IPDKVFQPRP
60 70 80 90 100
EDHEKYGGDP QNPHKLHIVT RIRSTKRRPY WEKDTIKMLG LQKAHSPQIH
110 120 130 140 150
KNIPSVNAKL KVVKHLIRIQ PLKLPQGLPT EETMSSTCLK STGELVVQWH
160
LKPVEQEAKS
Length:160
Mass (Da):18,412
Last modified:January 23, 2007 - v1
Checksum:i3B9D6975466B4B3E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR03068288 Genomic DNA. No translation available.
RefSeqiNP_001100373.1. NM_001106903.1.
XP_008765221.1. XM_008766999.2.
XP_008765278.1. XM_008767056.2.
XP_008765279.1. XM_008767057.2.
XP_017459345.1. XM_017603856.1.
XP_017459346.1. XM_017603857.1.
UniGeneiRn.7068.

Genome annotation databases

EnsembliENSRNOT00000083245; ENSRNOP00000068686; ENSRNOG00000049330.
ENSRNOT00000088544; ENSRNOP00000069419; ENSRNOG00000049330.
GeneIDi103693219.
301352.
KEGGirno:103693219.
rno:301352.
UCSCiRGD:1308196. rat.

Similar proteinsi

Entry informationi

Entry nameiRM30_RAT
AccessioniPrimary (citable) accession number: P0C2C1
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 23, 2007
Last sequence update: January 23, 2007
Last modified: November 22, 2017
This is version 82 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families