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Protein

40S ribosomal protein S4

Gene
N/A
Organism
Tetrahymena thermophila
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S4
Alternative name(s):
40S ribosomal protein S7
OrganismiTetrahymena thermophila
Taxonomic identifieri5911 [NCBI]
Taxonomic lineageiEukaryotaAlveolataCiliophoraIntramacronucleataOligohymenophoreaHymenostomatidaTetrahymeninaTetrahymenidaeTetrahymena

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 25925940S ribosomal protein S4PRO_0000260291Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei248 – 2481Phosphothreonine1 Publication
Modified residuei258 – 2581Phosphoserine1 Publication

Keywords - PTMi

Phosphoprotein

Proteomic databases

PRIDEiP0C233.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4BTSX-ray3.70W1-259[»]
4V5OX-ray3.93AW/BW1-259[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini41 – 10565S4 RNA-bindingAdd
BLAST

Sequence similaritiesi

Belongs to the ribosomal protein S4e family.Curated
Contains 1 S4 RNA-binding domain.Curated

Phylogenomic databases

eggNOGiCOG1471.

Family and domain databases

HAMAPiMF_00485. Ribosomal_S4e.
InterProiIPR000876. Ribosomal_S4e.
IPR013845. Ribosomal_S4e_central_region.
IPR013843. Ribosomal_S4e_N.
IPR018199. Ribosomal_S4e_N_CS.
[Graphical view]
PANTHERiPTHR11581. PTHR11581. 1 hit.
PfamiPF00900. Ribosomal_S4e. 1 hit.
PF08071. RS4NT. 1 hit.
[Graphical view]
PIRSFiPIRSF002116. Ribosomal_S4. 1 hit.
ProDomiPD002667. Ribosomal_S4e_central. 1 hit.
[Graphical view] [Entries sharing at least one domain]
PROSITEiPS00528. RIBOSOMAL_S4E. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P0C233-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
ARGPKKHLKR INAPKSWMLN KLGGIWATRP SQGPHKLRES LPLSVLLKER
60 70 80 90 100
LNYALNGRDV TLILNDKEGN VFVDQKVRRD KGYPTGLMDV VRIEKTDQSF
110 120 130 140 150
RILYDTKGRF VLKSLSKEEA KYKLLKVTAK AIGPNQIPYI VTHDSRTIRF
160 170 180 190 200
PNPEIKIGDT LKYDLVNNKI ENFAHLESGN VCYIQQGNNI GRVGIIQHIE
210 220 230 240 250
KHQGSFDICH VKDAKGNAFA TRLGNIFVLG QGKKLYIELP SGDGVRETIL

EERKRKFSY
Length:259
Mass (Da):29,462
Last modified:November 28, 2006 - v1
Checksum:iF3213BDDB5F3C103
GO

Cross-referencesi

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4BTSX-ray3.70W1-259[»]
4V5OX-ray3.93AW/BW1-259[»]
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiP0C233.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiCOG1471.

Family and domain databases

HAMAPiMF_00485. Ribosomal_S4e.
InterProiIPR000876. Ribosomal_S4e.
IPR013845. Ribosomal_S4e_central_region.
IPR013843. Ribosomal_S4e_N.
IPR018199. Ribosomal_S4e_N_CS.
[Graphical view]
PANTHERiPTHR11581. PTHR11581. 1 hit.
PfamiPF00900. Ribosomal_S4e. 1 hit.
PF08071. RS4NT. 1 hit.
[Graphical view]
PIRSFiPIRSF002116. Ribosomal_S4. 1 hit.
ProDomiPD002667. Ribosomal_S4e_central. 1 hit.
[Graphical view] [Entries sharing at least one domain]
PROSITEiPS00528. RIBOSOMAL_S4E. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The phosphorylated ribosomal protein S7 in Tetrahymena is homologous with mammalian S4 and the phosphorylated residues are located in the C-terminal region. Structural characterization of proteins separated by two-dimensional polyacrylamide gel electrophoresis."
    Palm L., Andersen J., Rahbek-Nielsen H., Hansen T.S., Kristiansen K., Hoejrup P.
    J. Biol. Chem. 270:6000-6005(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: PROTEIN SEQUENCE, PHOSPHORYLATION AT THR-248 AND SER-258.

Entry informationi

Entry nameiRS4_TETTH
AccessioniPrimary (citable) accession number: P0C233
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 28, 2006
Last sequence update: November 28, 2006
Last modified: June 24, 2015
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)

Miscellaneousi

Keywords - Technical termi

3D-structure, Direct protein sequencing

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.