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Protein

Endoglucanase 9

Gene

GLU1

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at transcript leveli

Functioni

Involved in cell wall assembly during cell elongation.1 Publication

Catalytic activityi

Endohydrolysis of (1->4)-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei514By similarity1
Active sitei562By similarity1
Active sitei571By similarity1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosidase, Hydrolase
Biological processCarbohydrate metabolism, Cell wall biogenesis/degradation, Cellulose degradation, Polysaccharide degradation

Protein family/group databases

CAZyiGH9. Glycoside Hydrolase Family 9.

Names & Taxonomyi

Protein namesi
Recommended name:
Endoglucanase 9 (EC:3.2.1.4)
Alternative name(s):
Endo-1,4-beta glucanase 9
OsCel9D
OsGLU1
Gene namesi
Name:GLU1
Ordered Locus Names:Os03g0329500, LOC_Os03g21210
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryzaOryza sativa
Proteomesi
  • UP000059680 Componenti: Chromosome 3

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 74CytoplasmicSequence analysisAdd BLAST74
Transmembranei75 – 95Helical; Signal-anchor for type II membrane proteinSequence analysisAdd BLAST21
Topological domaini96 – 619ExtracellularSequence analysisAdd BLAST524

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

Pathology & Biotechi

Disruption phenotypei

Plants are dwarf with reduction in cell elongation and decrease in cellulose content.1 Publication

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002492861 – 619Endoglucanase 9Add BLAST619

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Glycosylationi218N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi325N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi346N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi409N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi426N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi568N-linked (GlcNAc...) asparagineSequence analysis1

Keywords - PTMi

Glycoprotein

Proteomic databases

PaxDbiP0C1U4.
PRIDEiP0C1U4.

Expressioni

Tissue specificityi

Ubiquitous.2 Publications

Inductioni

By gibberellin (GA3) and brassinosteroid.1 Publication

Gene expression databases

GenevisibleiP0C1U4. OS.

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os03g21210.1.

Structurei

3D structure databases

ProteinModelPortaliP0C1U4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Signal-anchor, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG410IE9Y. Eukaryota.
ENOG410XP0H. LUCA.
HOGENOMiHOG000021033.
InParanoidiP0C1U4.
OMAiEFVWGSS.
OrthoDBiEOG093604V7.

Family and domain databases

InterProiView protein in InterPro
IPR008928. 6-hairpin_glycosidase-like.
IPR001701. Glyco_hydro_9.
IPR033126. Glyco_hydro_9_Asp/Glu_AS.
IPR018221. Glyco_hydro_9_His_AS.
PfamiView protein in Pfam
PF00759. Glyco_hydro_9. 1 hit.
SUPFAMiSSF48208. SSF48208. 1 hit.
PROSITEiView protein in PROSITE
PS00592. GLYCOSYL_HYDROL_F9_1. 1 hit.
PS00698. GLYCOSYL_HYDROL_F9_2. 1 hit.

Sequencei

Sequence statusi: Complete.

P0C1U4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSMYGRDPWG GPLEICHDSA TDDDRSRNLD LDRGALSRTL DETQQSWLLA
60 70 80 90 100
GPGDQGRKKK KYVDLGCLVV SRKLFVWTVG VLLAAAVFAG LVAGIAKAIP
110 120 130 140 150
RHHRPPPPPD DFTVALRKAL MFFNAQKSGK LPKNNNVHWR GNSCMKDGLS
160 170 180 190 200
DPAVGRSLVG GYYDAGDAVK FNFPAAFSMT LLSWSVIEYS AKYEAVGELG
210 220 230 240 250
HIRDTIKWGA DYFLKTFNST ADTIDRVVMQ VGSGATSPGS TQPNDHYCWM
260 270 280 290 300
RPEDIDYPRP VVECHACSDL AAEMAASLAA ASIVFKDNKA YSQKLVHGAT
310 320 330 340 350
TLFKFARQNR GRYSAGGSDA AKFYNSTSYW DEFVWGGSWM YLATGNSSYL
360 370 380 390 400
QLATHPKLAK HAGAYWGGPD YGVFSWDNKL TGAQVLLSRL RLFLSPGYPY
410 420 430 440 450
EEILRTFHNQ TSIIMCSYLP IFKSFNRTKG GLIQLNHGRP QPLQYVVNAA
460 470 480 490 500
FLASLYGDYL EAADTPGWYC GPHFYPIETL RNFARTQIEY ILGKNPLKMS
510 520 530 540 550
YVVGYGNRYP KRVHHRGASI PKNGVHYGCK GGWKWRETKK PNPNIIVGAM
560 570 580 590 600
VAGPDRHDGF KDVRKNYNYT EATLAGNAGL VAALVALSGE GHGVDKNTMF
610
SAVPPMFPSP PPPPAPWKP
Length:619
Mass (Da):68,369
Last modified:September 5, 2006 - v1
Checksum:i7F3CCB374071162A
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti57R → Q in AK102748 (PubMed:12869764).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB040817 mRNA. Translation: BAF37261.1.
DP000009 Genomic DNA. Translation: ABF95745.1.
AP008209 Genomic DNA. Translation: BAF11918.1.
AP014959 Genomic DNA. Translation: BAS84019.1.
AK102748 mRNA. No translation available.
RefSeqiXP_015627869.1. XM_015772383.1.
UniGeneiOs.13910.

Genome annotation databases

EnsemblPlantsiOS03T0329500-01; OS03T0329500-01; OS03G0329500.
GeneIDi4332724.
GrameneiOS03T0329500-01; OS03T0329500-01; OS03G0329500.
KEGGiosa:4332724.

Similar proteinsi

Entry informationi

Entry nameiGUN9_ORYSJ
AccessioniPrimary (citable) accession number: P0C1U4
Secondary accession number(s): A0A0P0VX27, A0P890, Q10LZ4
Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 5, 2006
Last sequence update: September 5, 2006
Last modified: August 30, 2017
This is version 76 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  3. SIMILARITY comments
    Index of protein domains and families