P0C1A1 (ASSY_DICD3) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 43.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Argininosuccinate synthase EC=6.3.4.5 Alternative name(s): Citrulline--aspartate ligase | ||||
| Gene names |
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| Organism | Dickeya dadantii (strain 3937) (Erwinia chrysanthemi (strain 3937)) [Complete proteome] [HAMAP] | ||||
| Taxonomic identifier | 198628 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Dickeya › ![]() |
Protein attributes
| Sequence length | 449 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Catalytic activity | ATP + L-citrulline + L-aspartate = AMP + diphosphate + N(omega)-(L-arginino)succinate. HAMAP-Rule MF_00581 |
| Pathway | Amino-acid biosynthesis; L-arginine biosynthesis; L-arginine from L-ornithine and carbamoyl phosphate: step 2/3. HAMAP-Rule MF_00581 |
| Subunit structure | Homotetramer By similarity. |
| Subcellular location | Cytoplasm By similarity. |
| Sequence similarities | Belongs to the argininosuccinate synthase family. Type 2 subfamily. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Amino-acid biosynthesis Arginine biosynthesis |
| Cellular component | Cytoplasm |
| Ligand | ATP-binding Nucleotide-binding |
| Molecular function | Ligase |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological_process | arginine biosynthetic process Inferred from electronic annotation. Source: HAMAP |
| Cellular_component | cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular_function | ATP binding Inferred from electronic annotation. Source: HAMAP argininosuccinate synthase activityInferred from electronic annotation. Source: HAMAP |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 449 | 449 | Argininosuccinate synthase HAMAP-Rule MF_00581 | PRO_0000233029 | |||||
Regions | |||||||||
| Nucleotide binding | 17 – 25 | 9 | ATP By similarity | ||||||
Sites | |||||||||
| Binding site | 43 | 1 | ATP By similarity | ||||||
| Binding site | 99 | 1 | Citrulline By similarity | ||||||
| Binding site | 129 | 1 | ATP; via amide nitrogen By similarity | ||||||
| Binding site | 131 | 1 | Aspartate By similarity | ||||||
| Binding site | 131 | 1 | ATP By similarity | ||||||
| Binding site | 135 | 1 | Aspartate By similarity | ||||||
| Binding site | 135 | 1 | Citrulline By similarity | ||||||
| Binding site | 136 | 1 | Aspartate By similarity | ||||||
| Binding site | 136 | 1 | ATP By similarity | ||||||
| Binding site | 139 | 1 | Citrulline By similarity | ||||||
| Binding site | 192 | 1 | Citrulline By similarity | ||||||
| Binding site | 194 | 1 | ATP By similarity | ||||||
| Binding site | 201 | 1 | Citrulline By similarity | ||||||
| Binding site | 203 | 1 | Citrulline By similarity | ||||||
| Binding site | 280 | 1 | Citrulline By similarity | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Genome sequence of the plant-pathogenic bacterium Dickeya dadantii 3937." Glasner J.D., Yang C.H., Reverchon S., Hugouvieux-Cotte-Pattat N., Condemine G., Bohin J.P., Van Gijsegem F., Yang S., Franza T., Expert D., Plunkett G. III, San Francisco M.J., Charkowski A.O., Py B., Bell K., Rauscher L., Rodriguez-Palenzuela P., Toussaint A. Perna N.T.J. Bacteriol. 193:2076-2077(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 3937. |
| [2] | "pecS: a locus controlling pectinase, cellulase and blue pigment production in Erwinia chrysanthemi." Reverchon S., Nasser W., Robert-Baudouy J. Mol. Microbiol. 11:1127-1139(1994) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 353-449. Strain: 3937. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP002038 Genomic DNA. Translation: ADN00621.1. X74409 Genomic DNA. Translation: CAA52426.1. |
| PIR | S35972. |
| RefSeq | YP_003885177.1. NC_014500.1. |
3D structure databases | |
| ModBase | Search... |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblBacteria | ADN00621; ADN00621; Dda3937_00977. |
| GeneID | 9735922. |
| KEGG | ddd:Dda3937_00977. |
| PATRIC | 42321198. VBIDicDad25310_4372. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| HOGENOM | HOG000230094. |
| KO | K01940. |
| OMA | GGRKEMS. |
Enzyme and pathway databases | |
| BioCyc | DDAD198628:GHFQ-4535-MONOMER. |
| UniPathway | UPA00068; UER00113. |
Family and domain databases | |
| Gene3D | 1.10.287.400. 1 hit. 3.40.50.620. 1 hit. 3.90.1260.10. 1 hit. |
| HAMAP | MF_00581. Arg_succ_synth_type2. |
| InterPro | IPR023437. Arg_succ_synth_type2_subfam. IPR001518. Arginosuc_synth. IPR018223. Arginosuc_synth_CS. IPR024074. AS_cat/multimer_dom_body. IPR024073. AS_multimer_C_tail. IPR014729. Rossmann-like_a/b/a_fold. [Graphical view] |
| PANTHER | PTHR11587. PTHR11587. 1 hit. |
| Pfam | PF00764. Arginosuc_synth. 1 hit. [Graphical view] |
| TIGRFAMs | TIGR00032. argG. 1 hit. |
| PROSITE | PS00564. ARGININOSUCCIN_SYN_1. 1 hit. PS00565. ARGININOSUCCIN_SYN_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | ASSY_DICD3 | ||||||||
| Accession | Primary (citable) accession number: P0C1A1 Secondary accession number(s): E0SMI2, P42181, Q9KHB9 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Prokaryotic Protein Annotation Program | ||||||||
Relevant documents
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| SIMILARITY comments Index of protein domains and families |

Clusters with
