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Protein

Immunogenic membrane protein YajC

Gene

yajC

Organism
Brucella abortus biovar 1 (strain 9-941)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Not known; elicits an immunogenic response in mice.By similarity

Enzyme and pathway databases

BioCyciBABO262698:GJC2-914-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Immunogenic membrane protein YajC
Gene namesi
Name:yajC
Ordered Locus Names:BruAb1_0902
OrganismiBrucella abortus biovar 1 (strain 9-941)
Taxonomic identifieri262698 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella
ProteomesiUP000000540 Componenti: Chromosome I

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei18 – 3821HelicalSequence AnalysisAdd
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
  2. plasma membrane Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 113113Immunogenic membrane protein YajCPRO_0000097022Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi262698.BruAb1_0902.

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0092 family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiCOG1862.
HOGENOMiHOG000018859.
KOiK03210.
OMAiGGDANSM.
OrthoDBiEOG6QP14M.

Family and domain databases

InterProiIPR003849. Preprotein_translocase_YajC.
[Graphical view]
PfamiPF02699. YajC. 1 hit.
[Graphical view]
PRINTSiPR01853. YAJCTRNLCASE.
TIGRFAMsiTIGR00739. yajC. 1 hit.

Sequencei

Sequence statusi: Complete.

P0C120-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFVTPAFAQA SGSVVGPDML MSILPFILIF VIMYFLIIRP QRTQMKKRQE
60 70 80 90 100
MLNSVRRGDT VVTGGGIVGK VLKVVDDNEL ELEIADGVRI RVVRATLMDV
110
RVKGEPVADN KNK
Length:113
Mass (Da):12,560
Last modified:February 6, 2006 - v1
Checksum:i9B1C0FB65DA9E2D5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017223 Genomic DNA. Translation: AAX74267.1.
RefSeqiYP_221628.1. NC_006932.1.

Genome annotation databases

EnsemblBacteriaiAAX74267; AAX74267; BruAb1_0902.
KEGGibmb:BruAb1_0902.
PATRICi17823436. VBIBruAbo15061_0949.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017223 Genomic DNA. Translation: AAX74267.1.
RefSeqiYP_221628.1. NC_006932.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi262698.BruAb1_0902.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAX74267; AAX74267; BruAb1_0902.
KEGGibmb:BruAb1_0902.
PATRICi17823436. VBIBruAbo15061_0949.

Phylogenomic databases

eggNOGiCOG1862.
HOGENOMiHOG000018859.
KOiK03210.
OMAiGGDANSM.
OrthoDBiEOG6QP14M.

Enzyme and pathway databases

BioCyciBABO262698:GJC2-914-MONOMER.

Family and domain databases

InterProiIPR003849. Preprotein_translocase_YajC.
[Graphical view]
PfamiPF02699. YajC. 1 hit.
[Graphical view]
PRINTSiPR01853. YAJCTRNLCASE.
TIGRFAMsiTIGR00739. yajC. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Completion of the genome sequence of Brucella abortus and comparison to the highly similar genomes of Brucella melitensis and Brucella suis."
    Halling S.M., Peterson-Burch B.D., Bricker B.J., Zuerner R.L., Qing Z., Li L.-L., Kapur V., Alt D.P., Olsen S.C.
    J. Bacteriol. 187:2715-2726(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 9-941.

Entry informationi

Entry nameiYAJC_BRUAB
AccessioniPrimary (citable) accession number: P0C120
Secondary accession number(s): P0A4Q3, Q57DL7, Q9ZG87
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 6, 2006
Last sequence update: February 6, 2006
Last modified: March 31, 2015
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Brucella abortus strain 9-941
    Brucella abortus (strain 9-941): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.