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Protein

Immunogenic membrane protein YajC

Gene

yajC

Organism
Brucella abortus biovar 1 (strain 9-941)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Not known; elicits an immunogenic response in mice.By similarity

Enzyme and pathway databases

BioCyciBABO262698:GJC2-914-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Immunogenic membrane protein YajC
Gene namesi
Name:yajC
Ordered Locus Names:BruAb1_0902
OrganismiBrucella abortus biovar 1 (strain 9-941)
Taxonomic identifieri262698 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella
Proteomesi
  • UP000000540 Componenti: Chromosome I

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei18 – 3821HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 113113Immunogenic membrane protein YajCPRO_0000097022Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliP0C120.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0092 family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

HOGENOMiHOG000018859.
KOiK03210.
OMAiEITVQKN.
OrthoDBiEOG6QP14M.

Family and domain databases

InterProiIPR003849. Preprotein_translocase_YajC.
[Graphical view]
PfamiPF02699. YajC. 1 hit.
[Graphical view]
PRINTSiPR01853. YAJCTRNLCASE.
SMARTiSM01323. YajC. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00739. yajC. 1 hit.

Sequencei

Sequence statusi: Complete.

P0C120-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFVTPAFAQA SGSVVGPDML MSILPFILIF VIMYFLIIRP QRTQMKKRQE
60 70 80 90 100
MLNSVRRGDT VVTGGGIVGK VLKVVDDNEL ELEIADGVRI RVVRATLMDV
110
RVKGEPVADN KNK
Length:113
Mass (Da):12,560
Last modified:February 7, 2006 - v1
Checksum:i9B1C0FB65DA9E2D5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017223 Genomic DNA. Translation: AAX74267.1.
RefSeqiWP_002964021.1. NC_006932.1.

Genome annotation databases

EnsemblBacteriaiAAX74267; AAX74267; BruAb1_0902.
GeneIDi3787581.
KEGGibmb:BruAb1_0902.
PATRICi17823436. VBIBruAbo15061_0949.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017223 Genomic DNA. Translation: AAX74267.1.
RefSeqiWP_002964021.1. NC_006932.1.

3D structure databases

ProteinModelPortaliP0C120.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAX74267; AAX74267; BruAb1_0902.
GeneIDi3787581.
KEGGibmb:BruAb1_0902.
PATRICi17823436. VBIBruAbo15061_0949.

Phylogenomic databases

HOGENOMiHOG000018859.
KOiK03210.
OMAiEITVQKN.
OrthoDBiEOG6QP14M.

Enzyme and pathway databases

BioCyciBABO262698:GJC2-914-MONOMER.

Family and domain databases

InterProiIPR003849. Preprotein_translocase_YajC.
[Graphical view]
PfamiPF02699. YajC. 1 hit.
[Graphical view]
PRINTSiPR01853. YAJCTRNLCASE.
SMARTiSM01323. YajC. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00739. yajC. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Completion of the genome sequence of Brucella abortus and comparison to the highly similar genomes of Brucella melitensis and Brucella suis."
    Halling S.M., Peterson-Burch B.D., Bricker B.J., Zuerner R.L., Qing Z., Li L.-L., Kapur V., Alt D.P., Olsen S.C.
    J. Bacteriol. 187:2715-2726(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 9-941.

Entry informationi

Entry nameiYAJC_BRUAB
AccessioniPrimary (citable) accession number: P0C120
Secondary accession number(s): P0A4Q3, Q57DL7, Q9ZG87
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 7, 2006
Last sequence update: February 7, 2006
Last modified: May 11, 2016
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Brucella abortus strain 9-941
    Brucella abortus (strain 9-941): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.