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P0C0Z4 (RL16_BRUA2) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 49. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
50S ribosomal protein L16
Gene names
Name:rplP
Ordered Locus Names:BAB1_1248
OrganismBrucella abortus (strain 2308) [Complete proteome] [HAMAP]
Taxonomic identifier359391 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella

Protein attributes

Sequence length137 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs By similarity. HAMAP-Rule MF_01342

Subunit structure

Part of the 50S ribosomal subunit By similarity. HAMAP-Rule MF_01342

Sequence similarities

Belongs to the ribosomal protein L16P family.

Ontologies

Keywords
   LigandRNA-binding
rRNA-binding
tRNA-binding
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionrRNA binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

structural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

tRNA binding

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 13713750S ribosomal protein L16 HAMAP-Rule MF_01342
PRO_0000062061

Sequences

Sequence LengthMass (Da)Tools
P0C0Z4 [UniParc].

Last modified February 7, 2006. Version 1.
Checksum: A0E5D0F0DD1C620B

FASTA13715,501
        10         20         30         40         50         60 
MMQPKRTKFR KQFKGRIHGN SKGGTDLNFG AFGLKALEPE RVTARQIEAA RRAITRHMKR 

        70         80         90        100        110        120 
AGRVWIRIFP DLPVTSKPTE VRMGKGKGSV DYWACRVAPG RVMFELDGVP EDVAREALRL 

       130 
GAAKLPIKTR FIQRIAE 

« Hide

References

[1]"Whole-genome analyses of speciation events in pathogenic Brucellae."
Chain P.S., Comerci D.J., Tolmasky M.E., Larimer F.W., Malfatti S.A., Vergez L.M., Aguero F., Land M.L., Ugalde R.A., Garcia E.
Infect. Immun. 73:8353-8361(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 2308.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AM040264 Genomic DNA. Translation: CAJ11204.1.
RefSeqYP_414634.1. NC_007618.1.

3D structure databases

ProteinModelPortalP0C0Z4.
SMRP0C0Z4. Positions 1-134.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING359391.BAB1_1248.

Proteomic databases

PRIDEP0C0Z4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAJ11204; CAJ11204; BAB1_1248.
GeneID3788921.
KEGGbmf:BAB1_1248.
PATRIC17845455. VBIBruMel86222_1297.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0197.
HOGENOMHOG000164573.
KOK02878.
OMALKTTFVT.
OrthoDBEOG6WHNWS.

Enzyme and pathway databases

BioCycBABO359391:GKDV-1270-MONOMER.
BMEL359391:GJOQ-1270-MONOMER.

Family and domain databases

Gene3D3.90.1170.10. 1 hit.
HAMAPMF_01342. Ribosomal_L16.
InterProIPR016180. Ribosomal_L10e/L16.
IPR000114. Ribosomal_L16.
IPR020798. Ribosomal_L16_CS.
[Graphical view]
PANTHERPTHR12220. PTHR12220. 1 hit.
PfamPF00252. Ribosomal_L16. 1 hit.
[Graphical view]
PRINTSPR00060. RIBOSOMALL16.
SUPFAMSSF54686. SSF54686. 1 hit.
TIGRFAMsTIGR01164. rplP_bact. 1 hit.
PROSITEPS00586. RIBOSOMAL_L16_1. 1 hit.
PS00701. RIBOSOMAL_L16_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRL16_BRUA2
AccessionPrimary (citable) accession number: P0C0Z4
Secondary accession number(s): Q57CR5
Entry history
Integrated into UniProtKB/Swiss-Prot: February 7, 2006
Last sequence update: February 7, 2006
Last modified: May 14, 2014
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Ribosomal proteins

Ribosomal proteins families and list of entries

Brucella abortus strain 2308

Brucella abortus (strain 2308): entries and gene names