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P0C0Z4

- RL16_BRUA2

UniProt

P0C0Z4 - RL16_BRUA2

Protein

50S ribosomal protein L16

Gene

rplP

Organism
Brucella abortus (strain 2308)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
  1. Functioni

    Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs.UniRule annotation

    GO - Molecular functioni

    1. rRNA binding Source: UniProtKB-HAMAP
    2. structural constituent of ribosome Source: InterPro
    3. tRNA binding Source: UniProtKB-KW

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding, tRNA-binding

    Enzyme and pathway databases

    BioCyciBABO359391:GKDV-1270-MONOMER.
    BMEL359391:GJOQ-1270-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L16UniRule annotation
    Gene namesi
    Name:rplPUniRule annotation
    Ordered Locus Names:BAB1_1248
    OrganismiBrucella abortus (strain 2308)
    Taxonomic identifieri359391 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella
    ProteomesiUP000002719: Chromosome I

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 13713750S ribosomal protein L16PRO_0000062061Add
    BLAST

    Proteomic databases

    PRIDEiP0C0Z4.

    Interactioni

    Subunit structurei

    Part of the 50S ribosomal subunit.UniRule annotation

    Protein-protein interaction databases

    STRINGi359391.BAB1_1248.

    Structurei

    3D structure databases

    ProteinModelPortaliP0C0Z4.
    SMRiP0C0Z4. Positions 1-134.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L16P family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0197.
    HOGENOMiHOG000164573.
    KOiK02878.
    OMAiLKTTFVT.
    OrthoDBiEOG6WHNWS.

    Family and domain databases

    Gene3Di3.90.1170.10. 1 hit.
    HAMAPiMF_01342. Ribosomal_L16.
    InterProiIPR016180. Ribosomal_L10e/L16.
    IPR000114. Ribosomal_L16.
    IPR020798. Ribosomal_L16_CS.
    [Graphical view]
    PANTHERiPTHR12220. PTHR12220. 1 hit.
    PfamiPF00252. Ribosomal_L16. 1 hit.
    [Graphical view]
    PRINTSiPR00060. RIBOSOMALL16.
    SUPFAMiSSF54686. SSF54686. 1 hit.
    TIGRFAMsiTIGR01164. rplP_bact. 1 hit.
    PROSITEiPS00586. RIBOSOMAL_L16_1. 1 hit.
    PS00701. RIBOSOMAL_L16_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P0C0Z4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MMQPKRTKFR KQFKGRIHGN SKGGTDLNFG AFGLKALEPE RVTARQIEAA    50
    RRAITRHMKR AGRVWIRIFP DLPVTSKPTE VRMGKGKGSV DYWACRVAPG 100
    RVMFELDGVP EDVAREALRL GAAKLPIKTR FIQRIAE 137
    Length:137
    Mass (Da):15,501
    Last modified:February 7, 2006 - v1
    Checksum:iA0E5D0F0DD1C620B
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AM040264 Genomic DNA. Translation: CAJ11204.1.
    RefSeqiYP_414634.1. NC_007618.1.

    Genome annotation databases

    EnsemblBacteriaiCAJ11204; CAJ11204; BAB1_1248.
    GeneIDi3788921.
    KEGGibmf:BAB1_1248.
    PATRICi17845455. VBIBruMel86222_1297.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AM040264 Genomic DNA. Translation: CAJ11204.1 .
    RefSeqi YP_414634.1. NC_007618.1.

    3D structure databases

    ProteinModelPortali P0C0Z4.
    SMRi P0C0Z4. Positions 1-134.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 359391.BAB1_1248.

    Proteomic databases

    PRIDEi P0C0Z4.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAJ11204 ; CAJ11204 ; BAB1_1248 .
    GeneIDi 3788921.
    KEGGi bmf:BAB1_1248.
    PATRICi 17845455. VBIBruMel86222_1297.

    Phylogenomic databases

    eggNOGi COG0197.
    HOGENOMi HOG000164573.
    KOi K02878.
    OMAi LKTTFVT.
    OrthoDBi EOG6WHNWS.

    Enzyme and pathway databases

    BioCyci BABO359391:GKDV-1270-MONOMER.
    BMEL359391:GJOQ-1270-MONOMER.

    Family and domain databases

    Gene3Di 3.90.1170.10. 1 hit.
    HAMAPi MF_01342. Ribosomal_L16.
    InterProi IPR016180. Ribosomal_L10e/L16.
    IPR000114. Ribosomal_L16.
    IPR020798. Ribosomal_L16_CS.
    [Graphical view ]
    PANTHERi PTHR12220. PTHR12220. 1 hit.
    Pfami PF00252. Ribosomal_L16. 1 hit.
    [Graphical view ]
    PRINTSi PR00060. RIBOSOMALL16.
    SUPFAMi SSF54686. SSF54686. 1 hit.
    TIGRFAMsi TIGR01164. rplP_bact. 1 hit.
    PROSITEi PS00586. RIBOSOMAL_L16_1. 1 hit.
    PS00701. RIBOSOMAL_L16_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 2308.

    Entry informationi

    Entry nameiRL16_BRUA2
    AccessioniPrimary (citable) accession number: P0C0Z4
    Secondary accession number(s): Q57CR5
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 7, 2006
    Last sequence update: February 7, 2006
    Last modified: October 1, 2014
    This is version 50 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Brucella abortus strain 2308
      Brucella abortus (strain 2308): entries and gene names
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3