P0C0P0 (DYR_STAEP) Reviewed, UniProtKB/Swiss-Prot
Last modified
January 25, 2012.
Version 35.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Dihydrofolate reductase Short name=DHFR EC=1.5.1.3 | ||||
| Gene names |
| ||||
| Organism | Staphylococcus epidermidis | ||||
| Taxonomic identifier | 1282 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Firmicutes › Bacillales › Staphylococcus |
Protein attributes
| Sequence length | 161 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis By similarity. |
| Catalytic activity | 5,6,7,8-tetrahydrofolate + NADP+ = 7,8-dihydrofolate + NADPH. |
| Pathway | |
| Miscellaneous | Trimethoprim sensitive. |
| Sequence similarities | Belongs to the dihydrofolate reductase family. Contains 1 DHFR (dihydrofolate reductase) domain. |
Ontologies
| Keywords | |
|---|---|
| Biological process | One-carbon metabolism |
| Ligand | NADP |
| Molecular function | Oxidoreductase |
| Gene Ontology (GO) | |
| Biological process | glycine biosynthetic process Inferred from electronic annotation. Source: InterPro nucleotide biosynthetic processInferred from electronic annotation. Source: InterPro one-carbon metabolic processInferred from electronic annotation. Source: UniProtKB-KW |
| Molecular function | NADP binding Inferred from electronic annotation. Source: InterPro dihydrofolate reductase activityInferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 161 | 161 | Dihydrofolate reductase | PRO_0000186413 | |||||
Regions | |||||||||
| Domain | 2 – 157 | 156 | DHFR | ||||||
| Nucleotide binding | 7 – 8 | 2 | NADP By similarity | ||||||
| Nucleotide binding | 15 – 20 | 6 | NADP By similarity | ||||||
| Nucleotide binding | 44 – 47 | 4 | NADP By similarity | ||||||
| Nucleotide binding | 63 – 66 | 4 | NADP By similarity | ||||||
| Nucleotide binding | 93 – 98 | 6 | NADP By similarity | ||||||
| Region | 6 – 8 | 3 | Substrate binding By similarity | ||||||
Sites | |||||||||
| Binding site | 28 | 1 | Substrate By similarity | ||||||
| Binding site | 58 | 1 | Substrate By similarity | ||||||
| Binding site | 112 | 1 | Substrate By similarity | ||||||
Experimental info | |||||||||
| Mutagenesis | 32 | 1 | V → I: 3-fold increase of KM for dihydrofolate. | ||||||
| Mutagenesis | 44 | 1 | G → A: 5-fold increase of KM for NADPH. | ||||||
| Mutagenesis | 99 | 1 | F → Y: Trimethoprim resistance. | ||||||
Sequences
| ||||||||||||||||||
References
| [1] | "Characterization of the gene for the chromosomal dihydrofolate reductase (DHFR) of Staphylococcus epidermidis ATCC 14990: the origin of the trimethoprim-resistant S1 DHFR from Staphylococcus aureus?" Dale G.E., Broger C., Hartman P.G., Langen H., Page M.G.P., Then R.L., Stueber D. J. Bacteriol. 177:2965-2970(1995) [PubMed: 7768789] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], MUTAGENESIS. Strain: ATCC 14990 / DSM 20044 / CIP 81.55. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | Z48233 Genomic DNA. Translation: CAA88269.1. |
| PIR | A57271. |
3D structure databases | |
| ProteinModelPortal | P0C0P0. |
| ModBase | Search... |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Family and domain databases | |
| InterPro | IPR012259. DHFR. IPR024072. DHFR-like_dom. IPR017925. DHFR_CS. IPR001796. DHFR_dom. [Graphical view] |
| Gene3D | G3DSA:3.40.430.10. G3DSA:3.40.430.10. 1 hit. |
| PANTHER | PTHR11549:SF1. DHFR. 1 hit. |
| Pfam | PF00186. DHFR_1. 1 hit. [Graphical view] |
| PIRSF | PIRSF000194. DHFR. 1 hit. |
| PRINTS | PR00070. DHFR. |
| SUPFAM | SSF53597. SSF53597. 1 hit. |
| PROSITE | PS00075. DHFR_1. 1 hit. PS51330. DHFR_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | DYR_STAEP | ||||||||
| Accession | Primary (citable) accession number: P0C0P0 Secondary accession number(s): Q59908 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Prokaryotic Protein Annotation Program | ||||||||
Relevant documents
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| SIMILARITY comments Index of protein domains and families |

Clusters with