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P0C0F9

- SODM_XANC8

UniProt

P0C0F9 - SODM_XANC8

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Protein
Superoxide dismutase [Mn]
Gene
sodA, sod, XC_1837
Organism
Xanthomonas campestris pv. campestris (strain 8004)
Status
Reviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems.

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.

Cofactori

Binds 1 manganese ion per subunit By similarity.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi27 – 271Manganese By similarity
Metal bindingi81 – 811Manganese By similarity
Metal bindingi164 – 1641Manganese By similarity
Metal bindingi168 – 1681Manganese By similarity

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. superoxide dismutase activity Source: UniProtKB-EC
Complete GO annotation...

GO - Biological processi

    Complete GO annotation...

    Keywords - Molecular functioni

    Oxidoreductase

    Keywords - Ligandi

    Manganese, Metal-binding

    Enzyme and pathway databases

    BioCyciXCAM314565:GCQG-1840-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Superoxide dismutase [Mn] (EC:1.15.1.1)
    Gene namesi
    Name:sodA
    Synonyms:sod
    Ordered Locus Names:XC_1837
    OrganismiXanthomonas campestris pv. campestris (strain 8004)
    Taxonomic identifieri314565 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXanthomonas
    ProteomesiUP000000420: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 203203Superoxide dismutase [Mn]
    PRO_0000160110Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi314565.XC_1837.

    Structurei

    3D structure databases

    ProteinModelPortaliP0C0F9.
    SMRiP0C0F9. Positions 1-201.

    Family & Domainsi

    Sequence similaritiesi

    Phylogenomic databases

    eggNOGiCOG0605.
    HOGENOMiHOG000013583.
    KOiK04564.
    OMAiPLPYDYN.
    OrthoDBiEOG63NMNT.

    Family and domain databases

    InterProiIPR001189. Mn/Fe_SOD.
    IPR019833. Mn/Fe_SOD_BS.
    IPR019832. Mn/Fe_SOD_C.
    IPR019831. Mn/Fe_SOD_N.
    [Graphical view]
    PANTHERiPTHR11404. PTHR11404. 1 hit.
    PfamiPF02777. Sod_Fe_C. 1 hit.
    PF00081. Sod_Fe_N. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000349. SODismutase. 1 hit.
    PRINTSiPR01703. MNSODISMTASE.
    SUPFAMiSSF46609. SSF46609. 1 hit.
    SSF54719. SSF54719. 1 hit.
    PROSITEiPS00088. SOD_MN. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P0C0F9-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAYTLPQLPY AYDALEPNID AQTMEIHHTK HHQTYINNVN AALEGTEYAD    50
    LPVEELVSKL KSLPENLQGP VRNNGGGHAN HSLFWTVMSP NGGGEPKGEV 100
    AKAIDKDIGG FEKFKEAFTK AALSRFGSGW AWLSVTPDKK VVVESTANQD 150
    SPLFEGNTPI LGLDVWEHAY YLKYQNRRPD YIGAFYNVVN WDEVERRYHA 200
    AIA 203
    Length:203
    Mass (Da):22,721
    Last modified:September 13, 2005 - v1
    Checksum:iC2CA1F9FB150C880
    GO

    Sequence conflict

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti53 – 531V → I in AAB47971. 1 Publication
    Sequence conflicti88 – 881M → L in AAB47971. 1 Publication
    Sequence conflicti123 – 1231L → V in AAB47971. 1 Publication
    Sequence conflicti141 – 1411V → L in AAB47971. 1 Publication
    Sequence conflicti180 – 1801D → E in AAB47971. 1 Publication
    Sequence conflicti188 – 1881V → A in AAB47971. 1 Publication
    Sequence conflicti192 – 1921D → E in AAB47971. 1 Publication

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U42464 Genomic DNA. Translation: AAB47971.1.
    CP000050 Genomic DNA. Translation: AAY48900.1.
    RefSeqiYP_242920.1. NC_007086.1.

    Genome annotation databases

    EnsemblBacteriaiAAY48900; AAY48900; XC_1837.
    GeneIDi3380384.
    KEGGixcb:XC_1837.
    PATRICi24065155. VBIXanCam24967_1976.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U42464 Genomic DNA. Translation: AAB47971.1 .
    CP000050 Genomic DNA. Translation: AAY48900.1 .
    RefSeqi YP_242920.1. NC_007086.1.

    3D structure databases

    ProteinModelPortali P0C0F9.
    SMRi P0C0F9. Positions 1-201.
    ModBasei Search...

    Protein-protein interaction databases

    STRINGi 314565.XC_1837.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAY48900 ; AAY48900 ; XC_1837 .
    GeneIDi 3380384.
    KEGGi xcb:XC_1837.
    PATRICi 24065155. VBIXanCam24967_1976.

    Phylogenomic databases

    eggNOGi COG0605.
    HOGENOMi HOG000013583.
    KOi K04564.
    OMAi PLPYDYN.
    OrthoDBi EOG63NMNT.

    Enzyme and pathway databases

    BioCyci XCAM314565:GCQG-1840-MONOMER.

    Family and domain databases

    InterProi IPR001189. Mn/Fe_SOD.
    IPR019833. Mn/Fe_SOD_BS.
    IPR019832. Mn/Fe_SOD_C.
    IPR019831. Mn/Fe_SOD_N.
    [Graphical view ]
    PANTHERi PTHR11404. PTHR11404. 1 hit.
    Pfami PF02777. Sod_Fe_C. 1 hit.
    PF00081. Sod_Fe_N. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000349. SODismutase. 1 hit.
    PRINTSi PR01703. MNSODISMTASE.
    SUPFAMi SSF46609. SSF46609. 1 hit.
    SSF54719. SSF54719. 1 hit.
    PROSITEi PS00088. SOD_MN. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    « Hide 'large scale' publications
    1. "A gene for superoxide dismutase from Xanthomonas campestris pv. campestris and its expression during bacterial-plant interactions."
      Smith S.G., Wilson T.J., Dow J.M., Daniels M.J.
      Mol. Plant Microbe Interact. 9:584-593(1996) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    2. "Comparative and functional genomic analyses of the pathogenicity of phytopathogen Xanthomonas campestris pv. campestris."
      Qian W., Jia Y., Ren S.-X., He Y.-Q., Feng J.-X., Lu L.-F., Sun Q., Ying G., Tang D.-J., Tang H., Wu W., Hao P., Wang L., Jiang B.-L., Zeng S., Gu W.-Y., Lu G., Rong L.
      , Tian Y., Yao Z., Fu G., Chen B., Fang R., Qiang B., Chen Z., Zhao G.-P., Tang J.-L., He C.
      Genome Res. 15:757-767(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 8004.

    Entry informationi

    Entry nameiSODM_XANC8
    AccessioniPrimary (citable) accession number: P0C0F9
    Secondary accession number(s): Q4UVM3
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: September 13, 2005
    Last sequence update: September 13, 2005
    Last modified: July 9, 2014
    This is version 53 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3

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