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Protein

UPF0162 protein YchA

Gene

ychA

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG11251-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0162 protein YchA
Alternative name(s):
Protein SirB1
Gene namesi
Name:ychA
Synonyms:sirB1
Ordered Locus Names:b1214, JW1205
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11251 ychA

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002023771 – 269UPF0162 protein YchAAdd BLAST269

Proteomic databases

PaxDbiP0AGM5
PRIDEiP0AGM5

Interactioni

Protein-protein interaction databases

BioGridi4260115, 14 interactors
DIPiDIP-35939N
IntActiP0AGM5, 5 interactors
STRINGi316385.ECDH10B_1267

Structurei

3D structure databases

ProteinModelPortaliP0AGM5
SMRiP0AGM5
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0162 family.Curated

Phylogenomic databases

eggNOGiENOG41063JG Bacteria
COG2912 LUCA
HOGENOMiHOG000281267
InParanoidiP0AGM5
OMAiLWIAAEH
PhylomeDBiP0AGM5

Family and domain databases

InterProiView protein in InterPro
IPR032698 SirB1_N
PfamiView protein in Pfam
PF13369 Transglut_core2, 1 hit

Sequencei

Sequence statusi: Complete.

P0AGM5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRSLADFEFN KAPLCEGMIL ACEAIRRDFP SQDVYDELER LVSLAKEEIS
60 70 80 90 100
QLLPLEEQLE KLIALFYGDW GFKASRGVYR LSDALWLDQV LKNRQGSAVS
110 120 130 140 150
LGAVLLWVAN RLDLPLLPVI FPTQLILRIE CPDGEIWLIN PFNGESLSEH
160 170 180 190 200
MLDVWLKGNI SPSAELFYED LDEADNIEVI RKLLDTLKAS LMEENQMELA
210 220 230 240 250
LRTSEALLQF NPEDPYEIRD RGLIYAQLDC EHVALNDLSY FVEQCPEDPI
260
SEMIRAQINN IAHKHIVLH
Length:269
Mass (Da):30,841
Last modified:December 20, 2005 - v1
Checksum:iB7EEAC15FE3BD763
GO

Sequence cautioni

The sequence BAA05916 differs from that shown. Reason: Frameshift at position 97.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U18555 Genomic DNA Translation: AAC43440.1
U00096 Genomic DNA Translation: AAC74298.1
AP009048 Genomic DNA Translation: BAA36072.1
D28567 Genomic DNA Translation: BAA05916.1 Frameshift.
X05552 Genomic DNA Translation: CAA29066.1
PIRiI83572
RefSeqiNP_415732.1, NC_000913.3
WP_001257044.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC74298; AAC74298; b1214
BAA36072; BAA36072; BAA36072
GeneIDi945784
KEGGiecj:JW1205
eco:b1214
PATRICifig|511145.12.peg.1262

Similar proteinsi

Entry informationi

Entry nameiSIRB1_ECOLI
AccessioniPrimary (citable) accession number: P0AGM5
Secondary accession number(s): P20101, P76020, Q9R325
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 20, 2005
Last sequence update: December 20, 2005
Last modified: March 28, 2018
This is version 86 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

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