Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Uncharacterized tRNA/rRNA methyltransferase YfiF

Gene

yfiF

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionMethyltransferase, Transferase

Enzyme and pathway databases

BioCyciEcoCyc:EG11786-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized tRNA/rRNA methyltransferase YfiF (EC:2.1.1.-)
Gene namesi
Name:yfiF
Ordered Locus Names:b2581, JW2565
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11786. yfiF.

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: EcoCyc

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001598141 – 345Uncharacterized tRNA/rRNA methyltransferase YfiFAdd BLAST345

Proteomic databases

PaxDbiP0AGJ5.
PRIDEiP0AGJ5.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
murGP174433EBI-547368,EBI-554881

Protein-protein interaction databases

BioGridi4263473. 33 interactors.
DIPiDIP-47835N.
IntActiP0AGJ5. 79 interactors.
MINTiMINT-1218417.
STRINGi316385.ECDH10B_2749.

Structurei

3D structure databases

ProteinModelPortaliP0AGJ5.
SMRiP0AGJ5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiENOG4105EIB. Bacteria.
COG0566. LUCA.
HOGENOMiHOG000218800.
InParanoidiP0AGJ5.
KOiK03214.
PhylomeDBiP0AGJ5.

Family and domain databases

Gene3Di3.30.1330.30. 1 hit.
3.40.1280.10. 1 hit.
InterProiView protein in InterPro
IPR029028. Alpha/beta_knot_MTases.
IPR029064. L30e-like.
IPR001537. SpoU_MeTrfase.
IPR013123. SpoU_subst-bd.
IPR029026. tRNA_m1G_MTases_N.
IPR016479. YfiF_prd.
PANTHERiPTHR12029:SF57. PTHR12029:SF57. 1 hit.
PfamiView protein in Pfam
PF00588. SpoU_methylase. 1 hit.
PF08032. SpoU_sub_bind. 1 hit.
PIRSFiPIRSF006280. YfiF_prd. 1 hit.
SMARTiView protein in SMART
SM00967. SpoU_sub_bind. 1 hit.
SUPFAMiSSF55315. SSF55315. 1 hit.
SSF75217. SSF75217. 1 hit.

Sequencei

Sequence statusi: Complete.

P0AGJ5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNDEMKGKSG KVKVMYVRSD DDSDKRTHNP RTGKGGGRPG KSRADGGRRP
60 70 80 90 100
ARDDKQSQPR DRKWEDSPWR TVSRAPGDET PEKADHGGIS GKSFIDPEVL
110 120 130 140 150
RRQRAEETRV YGENACQALF QSRPEAIVRA WFIQSVTPRF KEALRWMAAN
160 170 180 190 200
RKAYHVVDEA ELTKASGTEH HGGVCFLIKK RNGTTVQQWV SQAGAQDCVL
210 220 230 240 250
ALENESNPHN LGGMMRSCAH FGVKGVVVQD AALLESGAAI RTAEGGAEHV
260 270 280 290 300
QPITGDNIVN VLDDFRQAGY TVVTTSSEQG KPLFKTSLPA KMVLVLGQEY
310 320 330 340
EGLPDAARDP NDLRVKIDGT GNVAGLNISV ATGVLLGEWW RQNKA
Length:345
Mass (Da):37,784
Last modified:December 20, 2005 - v1
Checksum:i9845E9884D8369BF
GO

Sequence cautioni

The sequence D13169 differs from that shown. Reason: Frameshift at position 331.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D13169 Genomic DNA. No translation available.
U00096 Genomic DNA. Translation: AAC75634.1.
AP009048 Genomic DNA. Translation: BAA16467.2.
J03725 Genomic DNA. No translation available.
PIRiD65036.
RefSeqiNP_417076.1. NC_000913.3.
WP_000997403.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC75634; AAC75634; b2581.
BAA16467; BAA16467; BAA16467.
GeneIDi947066.
KEGGiecj:JW2565.
eco:b2581.
PATRICifig|1411691.4.peg.4153.

Similar proteinsi

Entry informationi

Entry nameiYFIF_ECOLI
AccessioniPrimary (citable) accession number: P0AGJ5
Secondary accession number(s): P33635, P76999
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 20, 2005
Last sequence update: December 20, 2005
Last modified: October 25, 2017
This is version 91 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families