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Protein

Inner membrane transport permease YhhJ

Gene

yhhJ

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transport

Enzyme and pathway databases

BioCyciEcoCyc:YHHJ-MONOMER.
ECOL316407:JW5677-MONOMER.

Protein family/group databases

TCDBi3.A.1.105.16. the atp-binding cassette (abc) superfamily.

Names & Taxonomyi

Protein namesi
Recommended name:
Inner membrane transport permease YhhJ
Gene namesi
Name:yhhJ
Ordered Locus Names:b3485, JW5677
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11767. yhhJ.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 22CytoplasmicSequence analysisAdd BLAST22
Transmembranei23 – 43HelicalSequence analysisAdd BLAST21
Topological domaini44 – 172PeriplasmicSequence analysisAdd BLAST129
Transmembranei173 – 193HelicalSequence analysisAdd BLAST21
Topological domaini194 – 229CytoplasmicSequence analysisAdd BLAST36
Transmembranei230 – 250HelicalSequence analysisAdd BLAST21
Topological domaini251 – 255PeriplasmicSequence analysis5
Transmembranei256 – 276HelicalSequence analysisAdd BLAST21
Topological domaini277 – 283CytoplasmicSequence analysis7
Transmembranei284 – 304HelicalSequence analysisAdd BLAST21
Topological domaini305 – 342PeriplasmicSequence analysisAdd BLAST38
Transmembranei343 – 363HelicalSequence analysisAdd BLAST21
Topological domaini364 – 374CytoplasmicSequence analysisAdd BLAST11

GO - Cellular componenti

  • integral component of plasma membrane Source: GO_Central
  • plasma membrane Source: EcoCyc
Complete GO annotation...

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001830081 – 374Inner membrane transport permease YhhJAdd BLAST374

Proteomic databases

PaxDbiP0AGH1.
PRIDEiP0AGH1.

Interactioni

Protein-protein interaction databases

BioGridi4262513. 8 interactors.
STRINGi511145.b3485.

Structurei

3D structure databases

ProteinModelPortaliP0AGH1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini133 – 369ABC transmembrane type-2PROSITE-ProRule annotationAdd BLAST237

Sequence similaritiesi

Contains 1 ABC transmembrane type-2 domain.PROSITE-ProRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105CMI. Bacteria.
COG0842. LUCA.
HOGENOMiHOG000270978.
InParanoidiP0AGH1.
KOiK01992.
OMAiIFMGTLA.
PhylomeDBiP0AGH1.

Family and domain databases

InterProiIPR000412. ABC_2_transport.
[Graphical view]
PROSITEiPS51012. ABC_TM2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P0AGH1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRHLRNIFNL GIKELRSLLG DKAMLTLIVF SFTVSVYSSA TVTPGSLNLA
60 70 80 90 100
PIAIADMDQS QLSNRIVNSF YRPWFLPPEM ITADEMDAGL DAGRYTFAIN
110 120 130 140 150
IPPNFQRDVL AGRQPDIQVN VDATRMSQAF TGNGYIQNII NGEVNSFVAR
160 170 180 190 200
YRDNSEPLVS LETRMRFNPN LDPAWFGGVM AIINNITMLA IVLTGSALIR
210 220 230 240 250
EREHGTVEHL LVMPITPFEI MMAKIWSMGL VVLVVSGLSL VLMVKGVLGV
260 270 280 290 300
PIEGSIPLFM LGVALSLFAT TSIGIFMGTI ARSMPQLGLL VILVLLPLQM
310 320 330 340 350
LSGGSTPRES MPQMVQDIML TMPTTHFVSL AQAILYRGAG FEIVWPQFLT
360 370
LMAIGGAFFT IALLRFRKTI GTMA
Length:374
Mass (Da):41,062
Last modified:November 24, 2009 - v3
Checksum:i02895FB13F493391
GO

Sequence cautioni

The sequence AAB18460 differs from that shown. Reason: Erroneous initiation.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00039 Genomic DNA. Translation: AAB18460.1. Different initiation.
U00096 Genomic DNA. Translation: AAC76510.4.
AP009048 Genomic DNA. Translation: BAE77808.1.
L02370 Genomic DNA. Translation: AAC61886.1.
RefSeqiNP_417942.6. NC_000913.3.
WP_001216257.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC76510; AAC76510; b3485.
BAE77808; BAE77808; BAE77808.
GeneIDi947991.
KEGGiecj:JW5677.
eco:b3485.
PATRICi32122414. VBIEscCol129921_3584.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00039 Genomic DNA. Translation: AAB18460.1. Different initiation.
U00096 Genomic DNA. Translation: AAC76510.4.
AP009048 Genomic DNA. Translation: BAE77808.1.
L02370 Genomic DNA. Translation: AAC61886.1.
RefSeqiNP_417942.6. NC_000913.3.
WP_001216257.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP0AGH1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4262513. 8 interactors.
STRINGi511145.b3485.

Protein family/group databases

TCDBi3.A.1.105.16. the atp-binding cassette (abc) superfamily.

Proteomic databases

PaxDbiP0AGH1.
PRIDEiP0AGH1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC76510; AAC76510; b3485.
BAE77808; BAE77808; BAE77808.
GeneIDi947991.
KEGGiecj:JW5677.
eco:b3485.
PATRICi32122414. VBIEscCol129921_3584.

Organism-specific databases

EchoBASEiEB1717.
EcoGeneiEG11767. yhhJ.

Phylogenomic databases

eggNOGiENOG4105CMI. Bacteria.
COG0842. LUCA.
HOGENOMiHOG000270978.
InParanoidiP0AGH1.
KOiK01992.
OMAiIFMGTLA.
PhylomeDBiP0AGH1.

Enzyme and pathway databases

BioCyciEcoCyc:YHHJ-MONOMER.
ECOL316407:JW5677-MONOMER.

Miscellaneous databases

PROiP0AGH1.

Family and domain databases

InterProiIPR000412. ABC_2_transport.
[Graphical view]
PROSITEiPS51012. ABC_TM2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYHHJ_ECOLI
AccessioniPrimary (citable) accession number: P0AGH1
Secondary accession number(s): P31993, P76703, Q2M7E8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 20, 2005
Last sequence update: November 24, 2009
Last modified: November 2, 2016
This is version 83 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.