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P0AGE6 (YIEF_ECOLI) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 67. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized protein YieF
Gene names
Name:yieF
Ordered Locus Names:b3713, JW3691
OrganismEscherichia coli (strain K12) [Reference proteome] [HAMAP]
Taxonomic identifier83333 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length188 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Sequence similarities

Belongs to the SsuE family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 188188Uncharacterized protein YieF
PRO_0000160596

Secondary structure

.............................. 188
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
P0AGE6 [UniParc].

Last modified December 20, 2005. Version 1.
Checksum: 78E163CC4826905D

FASTA18820,376
        10         20         30         40         50         60 
MSEKLQVVTL LGSLRKGSFN GMVARTLPKI APASMEVNAL PSIADIPLYD ADVQQEEGFP 

        70         80         90        100        110        120 
ATVEALAEQI RQADGVVIVT PEYNYSVPGG LKNAIDWLSR LPDQPLAGKP VLIQTSSMGV 

       130        140        150        160        170        180 
IGGARCQYHL RQILVFLDAM VMNKPEFMGG VIQNKVDPQT GEVIDQGTLD HLTGQLTAFG 


EFIQRVKI 

« Hide

References

[1]"DNA sequence and analysis of 136 kilobases of the Escherichia coli genome: organizational symmetry around the origin of replication."
Burland V.D., Plunkett G. III, Daniels D.L., Blattner F.R.
Genomics 16:551-561(1993) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / MG1655 / ATCC 47076.
[2]"The complete genome sequence of Escherichia coli K-12."
Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y.
Science 277:1453-1462(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / MG1655 / ATCC 47076.
[3]"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
L10328 Genomic DNA. Translation: AAA62064.1.
U00096 Genomic DNA. Translation: AAC76736.1.
AP009048 Genomic DNA. Translation: BAE77575.1.
PIRB65174.
RefSeqNP_418169.1. NC_000913.3.
YP_491716.1. NC_007779.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3SVLX-ray2.20A/B1-188[»]
ProteinModelPortalP0AGE6.
SMRP0AGE6. Positions 4-185.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

DIPDIP-36041N.
IntActP0AGE6. 2 interactions.
STRING511145.b3713.

Proteomic databases

PaxDbP0AGE6.
PRIDEP0AGE6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAC76736; AAC76736; b3713.
BAE77575; BAE77575; BAE77575.
GeneID12933177.
948225.
KEGGecj:Y75_p3455.
eco:b3713.
PATRIC32122921. VBIEscCol129921_3836.

Organism-specific databases

EchoBASEEB1674.
EcoGeneEG11723. yieF.

Phylogenomic databases

eggNOGCOG0431.
HOGENOMHOG000263119.
OMAIQNKVDT.
OrthoDBEOG6XHC2W.
PhylomeDBP0AGE6.
ProtClustDBCLSK880773.

Enzyme and pathway databases

BioCycEcoCyc:EG11723-MONOMER.
ECOL316407:JW3691-MONOMER.
MetaCyc:EG11723-MONOMER.

Gene expression databases

GenevestigatorP0AGE6.

Family and domain databases

InterProIPR005025. FMN_Rdtase-like.
[Graphical view]
PfamPF03358. FMN_red. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

PROP0AGE6.

Entry information

Entry nameYIEF_ECOLI
AccessionPrimary (citable) accession number: P0AGE6
Secondary accession number(s): P31465, Q2M831
Entry history
Integrated into UniProtKB/Swiss-Prot: December 20, 2005
Last sequence update: December 20, 2005
Last modified: April 16, 2014
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PDB cross-references

Index of Protein Data Bank (PDB) cross-references

Escherichia coli

Escherichia coli (strain K12): entries and cross-references to EcoGene