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Protein

Uncharacterized protein YibN

Gene

yibN

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG12295-MONOMER.
ECOL316407:JW3586-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YibN
Gene namesi
Name:yibN
Ordered Locus Names:b3611, JW3586
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12295. yibN.

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: EcoCyc
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001394241 – 143Uncharacterized protein YibNAdd BLAST143

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei91N6-acetyllysine1 Publication1

Keywords - PTMi

Acetylation

Proteomic databases

EPDiP0AG27.
PaxDbiP0AG27.
PRIDEiP0AG27.

Interactioni

Protein-protein interaction databases

IntActiP0AG27. 2 interactors.
STRINGi511145.b3611.

Structurei

3D structure databases

ProteinModelPortaliP0AG27.
SMRiP0AG27.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini50 – 143RhodanesePROSITE-ProRule annotationAdd BLAST94

Sequence similaritiesi

Contains 1 rhodanese domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiENOG4107YZP. Bacteria.
COG0607. LUCA.
HOGENOMiHOG000247776.
InParanoidiP0AG27.
OMAiEIMQFVS.
PhylomeDBiP0AG27.

Family and domain databases

Gene3Di3.40.250.10. 1 hit.
InterProiIPR001763. Rhodanese-like_dom.
[Graphical view]
PfamiPF00581. Rhodanese. 1 hit.
[Graphical view]
SMARTiSM00450. RHOD. 1 hit.
[Graphical view]
SUPFAMiSSF52821. SSF52821. 1 hit.
PROSITEiPS50206. RHODANESE_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P0AG27-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQEIMQFVGR HPILSIAWIA LLVAVLVTTF KSLTSKVKVI TRGEATRLIN
60 70 80 90 100
KEDAVVVDLR QRDDFRKGHI AGSINLLPSE IKANNVGELE KHKDKPVIVV
110 120 130 140
DGSGMQCQEP ANALTKAGFA QVFVLKEGVA GWAGENLPLV RGK
Length:143
Mass (Da):15,596
Last modified:December 20, 2005 - v1
Checksum:iD9B48087E46FAC02
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00039 Genomic DNA. Translation: AAB18588.1.
U00096 Genomic DNA. Translation: AAC76635.1.
AP009048 Genomic DNA. Translation: BAE77681.1.
PIRiS47832.
RefSeqiNP_418068.1. NC_000913.3.
WP_001156181.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC76635; AAC76635; b3611.
BAE77681; BAE77681; BAE77681.
GeneIDi948131.
KEGGiecj:JW3586.
eco:b3611.
PATRICi32122707. VBIEscCol129921_3730.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00039 Genomic DNA. Translation: AAB18588.1.
U00096 Genomic DNA. Translation: AAC76635.1.
AP009048 Genomic DNA. Translation: BAE77681.1.
PIRiS47832.
RefSeqiNP_418068.1. NC_000913.3.
WP_001156181.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP0AG27.
SMRiP0AG27.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiP0AG27. 2 interactors.
STRINGi511145.b3611.

Proteomic databases

EPDiP0AG27.
PaxDbiP0AG27.
PRIDEiP0AG27.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC76635; AAC76635; b3611.
BAE77681; BAE77681; BAE77681.
GeneIDi948131.
KEGGiecj:JW3586.
eco:b3611.
PATRICi32122707. VBIEscCol129921_3730.

Organism-specific databases

EchoBASEiEB2203.
EcoGeneiEG12295. yibN.

Phylogenomic databases

eggNOGiENOG4107YZP. Bacteria.
COG0607. LUCA.
HOGENOMiHOG000247776.
InParanoidiP0AG27.
OMAiEIMQFVS.
PhylomeDBiP0AG27.

Enzyme and pathway databases

BioCyciEcoCyc:EG12295-MONOMER.
ECOL316407:JW3586-MONOMER.

Miscellaneous databases

PROiP0AG27.

Family and domain databases

Gene3Di3.40.250.10. 1 hit.
InterProiIPR001763. Rhodanese-like_dom.
[Graphical view]
PfamiPF00581. Rhodanese. 1 hit.
[Graphical view]
SMARTiSM00450. RHOD. 1 hit.
[Graphical view]
SUPFAMiSSF52821. SSF52821. 1 hit.
PROSITEiPS50206. RHODANESE_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYIBN_ECOLI
AccessioniPrimary (citable) accession number: P0AG27
Secondary accession number(s): P37688, Q2M7S5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 20, 2005
Last sequence update: December 20, 2005
Last modified: November 2, 2016
This is version 81 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.