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P0AFV2 (YHID_ECOLI) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 66. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized protein YhiD
Gene names
Name:yhiD
Synonyms:yhhE
Ordered Locus Names:b3508, JW5670
OrganismEscherichia coli (strain K12) [Reference proteome] [HAMAP]
Taxonomic identifier83333 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length215 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Subcellular location

Cell inner membrane; Multi-pass membrane protein Potential.

Sequence similarities

Belongs to the MgtC/SapB family.

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 215215Uncharacterized protein YhiD
PRO_0000202032

Regions

Transmembrane1 – 2121Helical; Potential
Transmembrane36 – 5621Helical; Potential
Transmembrane67 – 8721Helical; Potential
Transmembrane92 – 11221Helical; Potential
Transmembrane118 – 13821Helical; Potential

Sequences

Sequence LengthMass (Da)Tools
P0AFV2 [UniParc].

Last modified December 20, 2005. Version 1.
Checksum: 4F3E986281C3CF99

FASTA21523,213
        10         20         30         40         50         60 
MTAEFIIRLI LAAIACGAIG MERQMRGKGA GLRTHVLIGM GSALFMIVSK YGFADVLSLD 

        70         80         90        100        110        120 
HVGLDPSRIA AQVVTGVGFI GAGNILVRNQ NIVGLTTAAD IWVTAAIGMV IGSGMYELGI 

       130        140        150        160        170        180 
YGSVMTLLVL EVFHQLTFRL MNKNYHLQLT LVNGNTVSML DWFKQQKIKT DLVSLQENED 

       190        200        210 
HEVVAIDIQL HATTSIEDLL RLLKGMAGVK GVSIS 

« Hide

References

« Hide 'large scale' references
[1]"Analysis of the Escherichia coli genome. V. DNA sequence of the region from 76.0 to 81.5 minutes."
Sofia H.J., Burland V., Daniels D.L., Plunkett G. III, Blattner F.R.
Nucleic Acids Res. 22:2576-2586(1994) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / MG1655 / ATCC 47076.
[2]"The complete genome sequence of Escherichia coli K-12."
Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y.
Science 277:1453-1462(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / MG1655 / ATCC 47076.
[3]"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
[4]"Function of the Escherichia coli nucleoid protein, H-NS: molecular analysis of a subset of proteins whose expression is enhanced in a hns deletion mutant."
Yoshida T., Ueguchi C., Yamada H., Mizuno T.
Mol. Gen. Genet. 237:113-122(1993) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-148.
Strain: K12.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
U00039 Genomic DNA. Translation: AAB18484.1.
U00096 Genomic DNA. Translation: AAC76533.1.
AP009048 Genomic DNA. Translation: BAE77786.1.
D11109 Genomic DNA. Translation: BAA01885.1.
PIRS47728.
RefSeqNP_417965.1. NC_000913.3.
YP_491927.1. NC_007779.1.

3D structure databases

ProteinModelPortalP0AFV2.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING511145.b3508.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAC76533; AAC76533; b3508.
BAE77786; BAE77786; BAE77786.
GeneID12932148.
948019.
KEGGecj:Y75_p3669.
eco:b3508.
PATRIC32122474. VBIEscCol129921_3615.

Organism-specific databases

EchoBASEEB1372.
EcoGeneEG11400. yhiD.

Phylogenomic databases

eggNOGCOG1285.
HOGENOMHOG000080250.
KOK07507.
OMANIHDINI.
OrthoDBEOG62K216.
PhylomeDBP0AFV2.
ProtClustDBPRK09977.

Enzyme and pathway databases

BioCycEcoCyc:EG11400-MONOMER.
ECOL316407:JW5670-MONOMER.

Gene expression databases

GenevestigatorP0AFV2.

Family and domain databases

InterProIPR003416. MgtCSapBSrpB_transpt.
[Graphical view]
PfamPF02308. MgtC. 1 hit.
[Graphical view]
PRINTSPR01837. MGTCSAPBPROT.
ProtoNetSearch...

Other

PROP0AFV2.

Entry information

Entry nameYHID_ECOLI
AccessionPrimary (citable) accession number: P0AFV2
Secondary accession number(s): P26606, Q2M7H0
Entry history
Integrated into UniProtKB/Swiss-Prot: December 20, 2005
Last sequence update: December 20, 2005
Last modified: April 16, 2014
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Escherichia coli

Escherichia coli (strain K12): entries and cross-references to EcoGene