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Protein

Uncharacterized protein YiiF

Gene

yiiF

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG11855-MONOMER.
ECOL316407:JW5563-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YiiF
Gene namesi
Name:yiiF
Ordered Locus Names:b3890, JW5563
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11855. yiiF.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 7272Uncharacterized protein YiiFPRO_0000169684Add
BLAST

Proteomic databases

PaxDbiP0AFU6.
PRIDEiP0AFU6.

Interactioni

Protein-protein interaction databases

BioGridi4261098. 12 interactions.
IntActiP0AFU6. 1 interaction.
STRINGi511145.b3890.

Structurei

3D structure databases

ProteinModelPortaliP0AFU6.
SMRiP0AFU6. Positions 1-72.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

To E.coli YiiE.Curated

Phylogenomic databases

eggNOGiENOG41068KX. Bacteria.
ENOG410XWG0. LUCA.
HOGENOMiHOG000169463.
OMAiQELRSEW.

Sequencei

Sequence statusi: Complete.

P0AFU6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGRILLDLSN EVIKQLDDLE VQRNLPRADL LREAVDQYLI NQSQTARTSV
60 70
PGIWQGCEED GVEYQRKLRE EW
Length:72
Mass (Da):8,442
Last modified:December 20, 2005 - v1
Checksum:i7ADC15BE45BCB1D1
GO

Sequence cautioni

The sequence AAB03023 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L19201 Genomic DNA. Translation: AAB03023.1. Different initiation.
U00096 Genomic DNA. Translation: AAD13452.2.
AP009048 Genomic DNA. Translation: BAE77419.1.
PIRiS40834.
RefSeqiNP_418326.2. NC_000913.3.

Genome annotation databases

EnsemblBacteriaiAAD13452; AAD13452; b3890.
BAE77419; BAE77419; BAE77419.
GeneIDi948385.
KEGGiecj:JW5563.
eco:b3890.
PATRICi32123285. VBIEscCol129921_4003.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L19201 Genomic DNA. Translation: AAB03023.1. Different initiation.
U00096 Genomic DNA. Translation: AAD13452.2.
AP009048 Genomic DNA. Translation: BAE77419.1.
PIRiS40834.
RefSeqiNP_418326.2. NC_000913.3.

3D structure databases

ProteinModelPortaliP0AFU6.
SMRiP0AFU6. Positions 1-72.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261098. 12 interactions.
IntActiP0AFU6. 1 interaction.
STRINGi511145.b3890.

Proteomic databases

PaxDbiP0AFU6.
PRIDEiP0AFU6.

Protocols and materials databases

DNASUi948385.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAD13452; AAD13452; b3890.
BAE77419; BAE77419; BAE77419.
GeneIDi948385.
KEGGiecj:JW5563.
eco:b3890.
PATRICi32123285. VBIEscCol129921_4003.

Organism-specific databases

EchoBASEiEB1801.
EcoGeneiEG11855. yiiF.

Phylogenomic databases

eggNOGiENOG41068KX. Bacteria.
ENOG410XWG0. LUCA.
HOGENOMiHOG000169463.
OMAiQELRSEW.

Enzyme and pathway databases

BioCyciEcoCyc:EG11855-MONOMER.
ECOL316407:JW5563-MONOMER.

Miscellaneous databases

PROiP0AFU6.

Family and domain databases

ProtoNetiSearch...

Entry informationi

Entry nameiYIIF_ECOLI
AccessioniPrimary (citable) accession number: P0AFU6
Secondary accession number(s): P32150, Q2M8I7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 20, 2005
Last sequence update: December 20, 2005
Last modified: September 7, 2016
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.