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Protein

NTE family protein RssA

Gene

rssA

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciEcoCyc:EG12120-MONOMER.
ECOL316407:JW1222-MONOMER.
RETL1328306-WGS:GSTH-2212-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
NTE family protein RssA
Gene namesi
Name:rssA
Synonyms:ychK
Ordered Locus Names:b1234, JW1222
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12120. rssA.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 301301NTE family protein RssAPRO_0000172531Add
BLAST

Proteomic databases

PaxDbiP0AFR0.

Interactioni

Protein-protein interaction databases

BioGridi4261927. 247 interactions.
DIPiDIP-35948N.
IntActiP0AFR0. 1 interaction.
STRINGi511145.b1234.

Structurei

3D structure databases

ProteinModelPortaliP0AFR0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini8 – 168161PatatinAdd
BLAST

Sequence similaritiesi

Belongs to the NTE family.Curated
Contains 1 patatin domain.Curated

Phylogenomic databases

eggNOGiENOG4105D78. Bacteria.
COG1752. LUCA.
HOGENOMiHOG000261886.
InParanoidiP0AFR0.
KOiK07001.
OrthoDBiEOG6KDKSZ.
PhylomeDBiP0AFR0.

Family and domain databases

InterProiIPR016035. Acyl_Trfase/lysoPLipase.
IPR001423. LysoPLipase_patatin_CS.
IPR002641. Patatin/PLipase_A2-rel.
[Graphical view]
PfamiPF01734. Patatin. 1 hit.
[Graphical view]
SUPFAMiSSF52151. SSF52151. 1 hit.
PROSITEiPS01237. UPF0028. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P0AFR0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRKIKIGLAL GSGAARGWSH IGVINALKKV GIEIDIVAGC SIGSLVGAAY
60 70 80 90 100
ACDRLSALED WVTSFSYWDV LRLMDLSWQR GGLLRGERVF NQYREIMPET
110 120 130 140 150
EIENCSRRFA AVATNLSTGR ELWFTEGDLH LAIRASCSIP GLMAPVAHNG
160 170 180 190 200
YWLVDGAVVN PIPISLTRAL GADIVIAVDL QHDAHLMQQD LLSFNVSEEN
210 220 230 240 250
SENGDSLPWH ARLKERLGSI TTRRAVTAPT ATEIMTTSIQ VLENRLKRNR
260 270 280 290 300
MAGDPPDILI QPVCPQISTL DFHRAHAAIA AGQLAVERKM DELLPLVRTN

I
Length:301
Mass (Da):33,067
Last modified:November 3, 2009 - v2
Checksum:i7AA66196B90A0C26
GO

Sequence cautioni

The sequence BAA36102.1 differs from that shown. Reason: Erroneous initiation. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M64675 Unassigned DNA. No translation available.
U00096 Genomic DNA. Translation: AAC74316.2.
AP009048 Genomic DNA. Translation: BAA36102.1. Different initiation.
PIRiB36871.
RefSeqiNP_415750.2. NC_000913.3.
WP_001295622.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC74316; AAC74316; b1234.
BAA36102; BAA36102; BAA36102.
GeneIDi945725.
KEGGiecj:JW1222.
eco:b1234.
PATRICi32117724. VBIEscCol129921_1282.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M64675 Unassigned DNA. No translation available.
U00096 Genomic DNA. Translation: AAC74316.2.
AP009048 Genomic DNA. Translation: BAA36102.1. Different initiation.
PIRiB36871.
RefSeqiNP_415750.2. NC_000913.3.
WP_001295622.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP0AFR0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261927. 247 interactions.
DIPiDIP-35948N.
IntActiP0AFR0. 1 interaction.
STRINGi511145.b1234.

Proteomic databases

PaxDbiP0AFR0.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74316; AAC74316; b1234.
BAA36102; BAA36102; BAA36102.
GeneIDi945725.
KEGGiecj:JW1222.
eco:b1234.
PATRICi32117724. VBIEscCol129921_1282.

Organism-specific databases

EchoBASEiEB2041.
EcoGeneiEG12120. rssA.

Phylogenomic databases

eggNOGiENOG4105D78. Bacteria.
COG1752. LUCA.
HOGENOMiHOG000261886.
InParanoidiP0AFR0.
KOiK07001.
OrthoDBiEOG6KDKSZ.
PhylomeDBiP0AFR0.

Enzyme and pathway databases

BioCyciEcoCyc:EG12120-MONOMER.
ECOL316407:JW1222-MONOMER.
RETL1328306-WGS:GSTH-2212-MONOMER.

Miscellaneous databases

PROiP0AFR0.

Family and domain databases

InterProiIPR016035. Acyl_Trfase/lysoPLipase.
IPR001423. LysoPLipase_patatin_CS.
IPR002641. Patatin/PLipase_A2-rel.
[Graphical view]
PfamiPF01734. Patatin. 1 hit.
[Graphical view]
SUPFAMiSSF52151. SSF52151. 1 hit.
PROSITEiPS01237. UPF0028. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Organization and functions of genes in the upstream region of tyrT of Escherichia coli: phenotypes of mutants with partial deletion of a new gene (tgs)."
    Boesl M., Kersten H.
    J. Bacteriol. 176:221-231(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: K12.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  4. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  5. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiRSSA_ECOLI
AccessioniPrimary (citable) accession number: P0AFR0
Secondary accession number(s): P37053, P37054
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 20, 2005
Last sequence update: November 3, 2009
Last modified: April 13, 2016
This is version 77 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.