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P0AFQ6

- RUTC_ECOL6

UniProt

P0AFQ6 - RUTC_ECOL6

Protein

Putative aminoacrylate peracid reductase RutC

Gene

rutC

Organism
Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 54 (01 Oct 2014)
      Sequence version 1 (20 Dec 2005)
      Previous versions | rss
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    Functioni

    May reduce aminoacrylate peracid to aminoacrylate. Required to remove a toxic intermediate produce by the pyrimidine nitrogen degradation By similarity.By similarity

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei106 – 1061By similarity

    GO - Molecular functioni

    1. oxidoreductase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. nitrogen utilization Source: UniProtKB-HAMAP
    2. uracil catabolic process Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Oxidoreductase

    Enzyme and pathway databases

    BioCyciECOL199310:C1147-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Putative aminoacrylate peracid reductase RutC (EC:1.-.-.-)
    Gene namesi
    Name:rutC
    Ordered Locus Names:c1147
    OrganismiEscherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
    Taxonomic identifieri199310 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
    ProteomesiUP000001410: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 128128Putative aminoacrylate peracid reductase RutCPRO_0000402382Add
    BLAST

    Expressioni

    Inductioni

    Up-regulated by the nitrogen regulatory protein C (NtrC also called GlnG) and repressed by RutR.Curated

    Interactioni

    Subunit structurei

    Homotrimer.By similarity

    Protein-protein interaction databases

    STRINGi199310.c1147.

    Structurei

    Secondary structure

    1
    128
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Beta strandi4 – 63
    Beta strandi20 – 245
    Beta strandi27 – 337
    Beta strandi42 – 443
    Helixi48 – 6518
    Helixi70 – 723
    Beta strandi73 – 819
    Helixi83 – 853
    Helixi86 – 9611
    Beta strandi103 – 1086
    Beta strandi118 – 1258

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    3V4DX-ray1.95A/B/C/D/E/F1-128[»]
    ProteinModelPortaliP0AFQ6.
    SMRiP0AFQ6. Positions 1-128.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the RutC family.Curated

    Phylogenomic databases

    HOGENOMiHOG000267215.
    KOiK09021.
    OMAiNYAAINQ.
    OrthoDBiEOG6QVRPF.

    Family and domain databases

    Gene3Di3.30.1330.40. 1 hit.
    HAMAPiMF_00831. RutC.
    InterProiIPR013813. Endoribo_LPSP/chorism_mut-like.
    IPR019898. RutC.
    IPR019897. YjgF-like_CS.
    IPR006175. YjgF/Yer057p/UK114.
    [Graphical view]
    PANTHERiPTHR11803. PTHR11803. 1 hit.
    PfamiPF01042. Ribonuc_L-PSP. 1 hit.
    [Graphical view]
    SUPFAMiSSF55298. SSF55298. 1 hit.
    TIGRFAMsiTIGR03610. RutC. 1 hit.
    PROSITEiPS01094. UPF0076. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P0AFQ6-1 [UniParc]FASTAAdd to Basket

    « Hide

    MPKSVIIPAG SSAPLAPFVP GTLADGVVYV SGTLAFDQHN NVLFADDPKA    50
    QTRHVLETIR KVIETAGGTM ADVTFNSIFI TDWKNYAAIN EIYAEFFPGD 100
    KPARFCIQCG LVKPDALVEI ATIAHIAK 128
    Length:128
    Mass (Da):13,763
    Last modified:December 20, 2005 - v1
    Checksum:i7D5FC2374597D907
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE014075 Genomic DNA. Translation: AAN79615.1.
    RefSeqiNP_753072.1. NC_004431.1.

    Genome annotation databases

    EnsemblBacteriaiAAN79615; AAN79615; c1147.
    GeneIDi1039370.
    KEGGiecc:c1147.
    PATRICi18280320. VBIEscCol75197_1087.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE014075 Genomic DNA. Translation: AAN79615.1 .
    RefSeqi NP_753072.1. NC_004431.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    3V4D X-ray 1.95 A/B/C/D/E/F 1-128 [» ]
    ProteinModelPortali P0AFQ6.
    SMRi P0AFQ6. Positions 1-128.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 199310.c1147.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAN79615 ; AAN79615 ; c1147 .
    GeneIDi 1039370.
    KEGGi ecc:c1147.
    PATRICi 18280320. VBIEscCol75197_1087.

    Phylogenomic databases

    HOGENOMi HOG000267215.
    KOi K09021.
    OMAi NYAAINQ.
    OrthoDBi EOG6QVRPF.

    Enzyme and pathway databases

    BioCyci ECOL199310:C1147-MONOMER.

    Family and domain databases

    Gene3Di 3.30.1330.40. 1 hit.
    HAMAPi MF_00831. RutC.
    InterProi IPR013813. Endoribo_LPSP/chorism_mut-like.
    IPR019898. RutC.
    IPR019897. YjgF-like_CS.
    IPR006175. YjgF/Yer057p/UK114.
    [Graphical view ]
    PANTHERi PTHR11803. PTHR11803. 1 hit.
    Pfami PF01042. Ribonuc_L-PSP. 1 hit.
    [Graphical view ]
    SUPFAMi SSF55298. SSF55298. 1 hit.
    TIGRFAMsi TIGR03610. RutC. 1 hit.
    PROSITEi PS01094. UPF0076. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: CFT073 / ATCC 700928 / UPEC.

    Entry informationi

    Entry nameiRUTC_ECOL6
    AccessioniPrimary (citable) accession number: P0AFQ6
    Secondary accession number(s): P75896
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: December 20, 2005
    Last sequence update: December 20, 2005
    Last modified: October 1, 2014
    This is version 54 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3