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Protein

UPF0126 inner membrane protein YadS

Gene

yadS

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG12333-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0126 inner membrane protein YadS
Gene namesi
Name:yadS
Ordered Locus Names:b0157, JW0153
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12333 yadS

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei1 – 21HelicalSequence analysisAdd BLAST21
Topological domaini22 – 29CytoplasmicSequence analysis8
Transmembranei30 – 50HelicalSequence analysisAdd BLAST21
Topological domaini51 – 58PeriplasmicSequence analysis8
Transmembranei59 – 79HelicalSequence analysisAdd BLAST21
Topological domaini80 – 85CytoplasmicSequence analysis6
Transmembranei86 – 106HelicalSequence analysisAdd BLAST21
Topological domaini107 – 112PeriplasmicSequence analysis6
Transmembranei113 – 133HelicalSequence analysisAdd BLAST21
Topological domaini134 – 148CytoplasmicSequence analysisAdd BLAST15
Transmembranei149 – 169HelicalSequence analysisAdd BLAST21
Topological domaini170PeriplasmicSequence analysis1
Transmembranei171 – 191HelicalSequence analysisAdd BLAST21
Topological domaini192 – 207CytoplasmicSequence analysisAdd BLAST16

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: EcoCyc

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001662971 – 207UPF0126 inner membrane protein YadSAdd BLAST207

Proteomic databases

PaxDbiP0AFP0
PRIDEiP0AFP0

Interactioni

Protein-protein interaction databases

BioGridi4261385, 28 interactors
STRINGi316385.ECDH10B_0137

Structurei

3D structure databases

ProteinModelPortaliP0AFP0
SMRiP0AFP0
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0126 family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105EN6 Bacteria
COG2860 LUCA
HOGENOMiHOG000218258
InParanoidiP0AFP0
OMAiFFDLCGT
PhylomeDBiP0AFP0

Family and domain databases

InterProiView protein in InterPro
IPR005115 UPF0126
PfamiView protein in Pfam
PF03458 UPF0126, 2 hits

Sequencei

Sequence statusi: Complete.

P0AFP0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLVYWLDIVG TAVFAISGVL LAGKLRMDPF GVLVLGVVTA VGGGTIRDMA
60 70 80 90 100
LDHGPVFWVK DPTDLVVAMV TSMLTIVLVR QPRRLPKWML PVLDAVGLAV
110 120 130 140 150
FVGIGVNKAF NAEAGPLIAV CMGVITGVGG GIIRDVLARE IPMILRTEIY
160 170 180 190 200
ATACIIGGIV HATAYYTFSV PLETASMMGM VVTLLIRLAA IRWHLKLPTF

ALDENGR
Length:207
Mass (Da):22,128
Last modified:December 20, 2005 - v1
Checksum:iC54E17DBF4C3D058
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U70214 Genomic DNA Translation: AAB08587.1
U00096 Genomic DNA Translation: AAC73268.1
AP009048 Genomic DNA Translation: BAB96734.1
PIRiS45226
RefSeqiNP_414699.1, NC_000913.3
WP_000964221.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC73268; AAC73268; b0157
BAB96734; BAB96734; BAB96734
GeneIDi949062
KEGGiecj:JW0153
eco:b0157
PATRICifig|1411691.4.peg.2123

Similar proteinsi

Entry informationi

Entry nameiYADS_ECOLI
AccessioniPrimary (citable) accession number: P0AFP0
Secondary accession number(s): P37027
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 20, 2005
Last sequence update: December 20, 2005
Last modified: March 28, 2018
This is version 82 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries
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Main funding by: National Institutes of Health