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Protein

Phosphate starvation-inducible protein PsiF

Gene

psiF

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG11401-MONOMER.
ECOL316407:JW5054-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphate starvation-inducible protein PsiF
Gene namesi
Name:psiF
Ordered Locus Names:b0384, JW5054
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11401. psiF.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2020Sequence analysisAdd
BLAST
Chaini21 – 10686Phosphate starvation-inducible protein PsiFPRO_0000022170Add
BLAST

Proteomic databases

PaxDbiP0AFM4.
PRIDEiP0AFM4.

Interactioni

Protein-protein interaction databases

BioGridi4259828. 18 interactions.
STRINGi511145.b0384.

Structurei

3D structure databases

ProteinModelPortaliP0AFM4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG4105VIF. Bacteria.
ENOG41121V4. LUCA.
HOGENOMiHOG000261255.
InParanoidiP0AFM4.
OMAiDCNQQAT.
OrthoDBiEOG68Q0WB.

Family and domain databases

InterProiIPR011690. P_starv_induced_PsiF.
[Graphical view]
PfamiPF07769. PsiF_repeat. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P0AFM4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKITLLVTLL FGLVFLTTVG AAERTLTPQQ QRMTSCNQQA TAQALKGDAR
60 70 80 90 100
KTYMSDCLKN SKSAPGEKSL TPQQQKMREC NNQATQQSLK GDDRNKFMSA

CLKKAA
Length:106
Mass (Da):11,687
Last modified:December 20, 2005 - v1
Checksum:iE40E93549D93F695
GO

Sequence cautioni

The sequence AAB18108.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M13345 Genomic DNA. Translation: AAA83894.1.
U00096 Genomic DNA. Translation: AAC73487.2.
AP009048 Genomic DNA. Translation: BAE76165.1.
U73857 Genomic DNA. Translation: AAB18108.1. Different initiation.
RefSeqiNP_414918.4. NC_000913.3.
WP_001295332.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC73487; AAC73487; b0384.
BAE76165; BAE76165; BAE76165.
GeneIDi945040.
KEGGiecj:JW5054.
eco:b0384.
PATRICi32115909. VBIEscCol129921_0396.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M13345 Genomic DNA. Translation: AAA83894.1.
U00096 Genomic DNA. Translation: AAC73487.2.
AP009048 Genomic DNA. Translation: BAE76165.1.
U73857 Genomic DNA. Translation: AAB18108.1. Different initiation.
RefSeqiNP_414918.4. NC_000913.3.
WP_001295332.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP0AFM4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4259828. 18 interactions.
STRINGi511145.b0384.

Proteomic databases

PaxDbiP0AFM4.
PRIDEiP0AFM4.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC73487; AAC73487; b0384.
BAE76165; BAE76165; BAE76165.
GeneIDi945040.
KEGGiecj:JW5054.
eco:b0384.
PATRICi32115909. VBIEscCol129921_0396.

Organism-specific databases

EchoBASEiEB1373.
EcoGeneiEG11401. psiF.

Phylogenomic databases

eggNOGiENOG4105VIF. Bacteria.
ENOG41121V4. LUCA.
HOGENOMiHOG000261255.
InParanoidiP0AFM4.
OMAiDCNQQAT.
OrthoDBiEOG68Q0WB.

Enzyme and pathway databases

BioCyciEcoCyc:EG11401-MONOMER.
ECOL316407:JW5054-MONOMER.

Miscellaneous databases

PROiP0AFM4.

Family and domain databases

InterProiIPR011690. P_starv_induced_PsiF.
[Graphical view]
PfamiPF07769. PsiF_repeat. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Nucleotide sequence of the alkaline phosphatase gene of Escherichia coli."
    Chang C.N., Kuang W.-J., Chen E.Y.
    Gene 44:121-125(1986) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  2. "Sequence of minutes 4-25 of Escherichia coli."
    Chung E., Allen E., Araujo R., Aparicio A.M., Davis K., Duncan M., Federspiel N., Hyman R., Kalman S., Komp C., Kurdi O., Lew H., Lin D., Namath A., Oefner P., Roberts D., Schramm S., Davis R.W.
    Submitted (JAN-1997) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  4. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  5. "Identification of phosphate starvation-inducible genes in Escherichia coli K-12 by DNA sequence analysis of psi::lacZ(Mu d1) transcriptional fusions."
    Metcalf W.W., Steed P.M., Wanner B.L.
    J. Bacteriol. 172:3191-3200(1990) [PubMed] [Europe PMC] [Abstract]
    Cited for: CHARACTERIZATION.
    Strain: K12.

Entry informationi

Entry nameiPSIF_ECOLI
AccessioniPrimary (citable) accession number: P0AFM4
Secondary accession number(s): P27295, Q2MC41
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 20, 2005
Last sequence update: December 20, 2005
Last modified: January 20, 2016
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.