Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Protein PhnA

Gene

phnA

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG10711-MONOMER.
ECOL316407:JW4069-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Protein PhnA
Gene namesi
Name:phnA
Synonyms:yjdM
Ordered Locus Names:b4108, JW4069
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG10711. yjdM.

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: EcoCyc
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 111111Protein PhnAPRO_0000058383Add
BLAST

Proteomic databases

EPDiP0AFJ1.
PaxDbiP0AFJ1.
PRIDEiP0AFJ1.

Interactioni

Protein-protein interaction databases

BioGridi4263088. 7 interactions.
DIPiDIP-48079N.
IntActiP0AFJ1. 2 interactions.
STRINGi511145.b4108.

Structurei

3D structure databases

ProteinModelPortaliP0AFJ1.
SMRiP0AFJ1. Positions 2-110.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4108Z8G. Bacteria.
COG2824. LUCA.
HOGENOMiHOG000228486.
InParanoidiP0AFJ1.
KOiK06193.
OMAiSCLYEWN.
OrthoDBiEOG6J752H.
PhylomeDBiP0AFJ1.

Family and domain databases

InterProiIPR004624. PhnA.
IPR013988. PhnA_C.
IPR013987. PhnA_N.
[Graphical view]
PfamiPF03831. PhnA. 1 hit.
PF08274. PhnA_Zn_Ribbon. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00686. phnA. 1 hit.

Sequencei

Sequence statusi: Complete.

P0AFJ1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSLPHCPKCN SEYTYEDNGM YICPECAYEW NDAEPAQESD ELIVKDANGN
60 70 80 90 100
LLADGDSVTI IKDLKVKGSS SMLKIGTKVK NIRLVEGDHN IDCKIDGFGP
110
MKLKSEFVKK N
Length:111
Mass (Da):12,345
Last modified:December 20, 2005 - v1
Checksum:i52FD9C7B197F17E4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
J05260 Genomic DNA. Translation: AAA24337.1.
U14003 Genomic DNA. Translation: AAA97007.1.
U00096 Genomic DNA. Translation: AAC77069.1.
AP009048 Genomic DNA. Translation: BAE78110.1.
PIRiB35718.
RefSeqiNP_418532.1. NC_000913.3.
WP_001300891.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC77069; AAC77069; b4108.
BAE78110; BAE78110; BAE78110.
GeneIDi948621.
KEGGiecj:JW4069.
eco:b4108.
PATRICi32123781. VBIEscCol129921_4239.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
J05260 Genomic DNA. Translation: AAA24337.1.
U14003 Genomic DNA. Translation: AAA97007.1.
U00096 Genomic DNA. Translation: AAC77069.1.
AP009048 Genomic DNA. Translation: BAE78110.1.
PIRiB35718.
RefSeqiNP_418532.1. NC_000913.3.
WP_001300891.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP0AFJ1.
SMRiP0AFJ1. Positions 2-110.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4263088. 7 interactions.
DIPiDIP-48079N.
IntActiP0AFJ1. 2 interactions.
STRINGi511145.b4108.

Proteomic databases

EPDiP0AFJ1.
PaxDbiP0AFJ1.
PRIDEiP0AFJ1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC77069; AAC77069; b4108.
BAE78110; BAE78110; BAE78110.
GeneIDi948621.
KEGGiecj:JW4069.
eco:b4108.
PATRICi32123781. VBIEscCol129921_4239.

Organism-specific databases

EchoBASEiEB0705.
EcoGeneiEG10711. yjdM.

Phylogenomic databases

eggNOGiENOG4108Z8G. Bacteria.
COG2824. LUCA.
HOGENOMiHOG000228486.
InParanoidiP0AFJ1.
KOiK06193.
OMAiSCLYEWN.
OrthoDBiEOG6J752H.
PhylomeDBiP0AFJ1.

Enzyme and pathway databases

BioCyciEcoCyc:EG10711-MONOMER.
ECOL316407:JW4069-MONOMER.

Miscellaneous databases

PROiP0AFJ1.

Family and domain databases

InterProiIPR004624. PhnA.
IPR013988. PhnA_C.
IPR013987. PhnA_N.
[Graphical view]
PfamiPF03831. PhnA. 1 hit.
PF08274. PhnA_Zn_Ribbon. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00686. phnA. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Molecular biology of carbon-phosphorus bond cleavage. Cloning and sequencing of the phn (psiD) genes involved in alkylphosphonate uptake and C-P lyase activity in Escherichia coli B."
    Chen C.-M., Ye Q.-Z., Zhu Z., Wanner B.L., Walsh C.T.
    J. Biol. Chem. 265:4461-4471(1990) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: B.
  2. "Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes."
    Burland V.D., Plunkett G. III, Sofia H.J., Daniels D.L., Blattner F.R.
    Nucleic Acids Res. 23:2105-2119(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  4. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiPHNA_ECOLI
AccessioniPrimary (citable) accession number: P0AFJ1
Secondary accession number(s): P16680, Q2M6J6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 20, 2005
Last sequence update: December 20, 2005
Last modified: March 16, 2016
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.