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P0AFH8

- OSMY_ECOLI

UniProt

P0AFH8 - OSMY_ECOLI

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Protein

Osmotically-inducible protein Y

Gene
osmY, b4376, JW4338
Organism
Escherichia coli (strain K12)
Status
Reviewed - Annotation score: 3 out of 5 - Experimental evidence at protein leveli

Functioni

GO - Biological processi

  1. response to osmotic stress Source: EcoCyc
Complete GO annotation...

Enzyme and pathway databases

BioCyciEcoCyc:EG11391-MONOMER.
ECOL316407:JW4338-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Osmotically-inducible protein Y
Gene namesi
Name:osmY
Ordered Locus Names:b4376, JW4338
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
ProteomesiUP000000318: Chromosome, UP000000625: Chromosome

Organism-specific databases

EcoGeneiEG11391. osmY.

Subcellular locationi

GO - Cellular componenti

  1. periplasmic space Source: EcoCyc
Complete GO annotation...

Keywords - Cellular componenti

Periplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 28283 PublicationsAdd
BLAST
Chaini29 – 201173Osmotically-inducible protein YPRO_0000021953Add
BLAST

Proteomic databases

PaxDbiP0AFH8.
PRIDEiP0AFH8.

Expressioni

Inductioni

By elevated osmotic pressure in the growth medium.

Gene expression databases

GenevestigatoriP0AFH8.

Interactioni

Protein-protein interaction databases

DIPiDIP-47968N.
IntActiP0AFH8. 3 interactions.
STRINGi511145.b4376.

Structurei

3D structure databases

ProteinModelPortaliP0AFH8.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini55 – 12369BON 1Add
BLAST
Domaini134 – 20168BON 2Add
BLAST

Sequence similaritiesi

Contains 2 BON domains.

Keywords - Domaini

Repeat, Signal

Phylogenomic databases

eggNOGiCOG2823.
HOGENOMiHOG000127831.
KOiK04065.
OMAiGYMDDSG.
OrthoDBiEOG6B3669.
PhylomeDBiP0AFH8.

Family and domain databases

InterProiIPR007055. BON_dom.
IPR014004. Transpt-assoc_nodulatn_dom_bac.
[Graphical view]
PfamiPF04972. BON. 2 hits.
[Graphical view]
SMARTiSM00749. BON. 2 hits.
[Graphical view]
PROSITEiPS50914. BON. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P0AFH8-1 [UniParc]FASTAAdd to Basket

« Hide

MTMTRLKISK TLLAVMLTSA VATGSAYAEN NAQTTNESAG QKVDSSMNKV    50
GNFMDDSAIT AKVKAALVDH DNIKSTDISV KTDQKVVTLS GFVESQAQAE 100
EAVKVAKGVE GVTSVSDKLH VRDAKEGSVK GYAGDTATTS EIKAKLLADD 150
IVPSRHVKVE TTDGVVQLSG TVDSQAQSDR AESIAKAVDG VKSVKNDLKT 200
K 201
Length:201
Mass (Da):21,074
Last modified:December 20, 2005 - v1
Checksum:iBF74D4388D984B93
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
M89635 Unassigned DNA. Translation: AAA16621.1.
U14003 Genomic DNA. Translation: AAA97272.1.
U00096 Genomic DNA. Translation: AAC77329.1.
AP009048 Genomic DNA. Translation: BAE78364.1.
S67278 Genomic DNA. Translation: AAP14005.1.
PIRiA41899.
RefSeqiNP_418793.1. NC_000913.3.
YP_492505.1. NC_007779.1.

Genome annotation databases

EnsemblBacteriaiAAC77329; AAC77329; b4376.
BAE78364; BAE78364; BAE78364.
GeneIDi12933797.
948895.
KEGGiecj:Y75_p4259.
eco:b4376.
PATRICi32124362. VBIEscCol129921_4521.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
M89635 Unassigned DNA. Translation: AAA16621.1 .
U14003 Genomic DNA. Translation: AAA97272.1 .
U00096 Genomic DNA. Translation: AAC77329.1 .
AP009048 Genomic DNA. Translation: BAE78364.1 .
S67278 Genomic DNA. Translation: AAP14005.1 .
PIRi A41899.
RefSeqi NP_418793.1. NC_000913.3.
YP_492505.1. NC_007779.1.

3D structure databases

ProteinModelPortali P0AFH8.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

DIPi DIP-47968N.
IntActi P0AFH8. 3 interactions.
STRINGi 511145.b4376.

Proteomic databases

PaxDbi P0AFH8.
PRIDEi P0AFH8.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAC77329 ; AAC77329 ; b4376 .
BAE78364 ; BAE78364 ; BAE78364 .
GeneIDi 12933797.
948895.
KEGGi ecj:Y75_p4259.
eco:b4376.
PATRICi 32124362. VBIEscCol129921_4521.

Organism-specific databases

EchoBASEi EB1364.
EcoGenei EG11391. osmY.

Phylogenomic databases

eggNOGi COG2823.
HOGENOMi HOG000127831.
KOi K04065.
OMAi GYMDDSG.
OrthoDBi EOG6B3669.
PhylomeDBi P0AFH8.

Enzyme and pathway databases

BioCyci EcoCyc:EG11391-MONOMER.
ECOL316407:JW4338-MONOMER.

Miscellaneous databases

PROi P0AFH8.

Gene expression databases

Genevestigatori P0AFH8.

Family and domain databases

InterProi IPR007055. BON_dom.
IPR014004. Transpt-assoc_nodulatn_dom_bac.
[Graphical view ]
Pfami PF04972. BON. 2 hits.
[Graphical view ]
SMARTi SM00749. BON. 2 hits.
[Graphical view ]
PROSITEi PS50914. BON. 2 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "osmY, a new hyperosmotically inducible gene, encodes a periplasmic protein in Escherichia coli."
    Yim H.H., Villarejo M.
    J. Bacteriol. 174:3637-3644(1992) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], PROTEIN SEQUENCE OF 29-43.
    Strain: K12.
  2. "Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes."
    Burland V.D., Plunkett G. III, Sofia H.J., Daniels D.L., Blattner F.R.
    Nucleic Acids Res. 23:2105-2119(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  4. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  5. "Complex transcriptional control of the sigma s-dependent stationary-phase-induced and osmotically regulated osmY (csi-5) gene suggests novel roles for Lrp, cyclic AMP (cAMP) receptor protein-cAMP complex, and integration host factor in the stationary-phase response of Escherichia coli."
    Lange R., Barth M., Hengge-Aronis R.
    J. Bacteriol. 175:7910-7917(1993) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-12.
  6. "Comparing the predicted and observed properties of proteins encoded in the genome of Escherichia coli K-12."
    Link A.J., Robison K., Church G.M.
    Electrophoresis 18:1259-1313(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: PROTEIN SEQUENCE OF 29-40.
    Strain: K12 / EMG2.
  7. Cited for: PROTEIN SEQUENCE OF 29-32.
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiOSMY_ECOLI
AccessioniPrimary (citable) accession number: P0AFH8
Secondary accession number(s): P27291, Q2M5U2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 20, 2005
Last sequence update: December 20, 2005
Last modified: May 14, 2014
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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