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P0AFH8

- OSMY_ECOLI

UniProt

P0AFH8 - OSMY_ECOLI

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Protein

Osmotically-inducible protein Y

Gene

osmY

Organism
Escherichia coli (strain K12)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli

Functioni

GO - Biological processi

  1. response to osmotic stress Source: EcoCyc
Complete GO annotation...

Enzyme and pathway databases

BioCyciEcoCyc:EG11391-MONOMER.
ECOL316407:JW4338-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Osmotically-inducible protein Y
Gene namesi
Name:osmY
Ordered Locus Names:b4376, JW4338
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
ProteomesiUP000000318: Chromosome, UP000000625: Chromosome

Organism-specific databases

EcoGeneiEG11391. osmY.

Subcellular locationi

GO - Cellular componenti

  1. periplasmic space Source: EcoCyc
Complete GO annotation...

Keywords - Cellular componenti

Periplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 28283 PublicationsAdd
BLAST
Chaini29 – 201173Osmotically-inducible protein YPRO_0000021953Add
BLAST

Proteomic databases

PaxDbiP0AFH8.
PRIDEiP0AFH8.

Expressioni

Inductioni

By elevated osmotic pressure in the growth medium.

Gene expression databases

GenevestigatoriP0AFH8.

Interactioni

Protein-protein interaction databases

DIPiDIP-47968N.
IntActiP0AFH8. 3 interactions.
STRINGi511145.b4376.

Structurei

3D structure databases

ProteinModelPortaliP0AFH8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini55 – 12369BON 1PROSITE-ProRule annotationAdd
BLAST
Domaini134 – 20168BON 2PROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 2 BON domains.PROSITE-ProRule annotation

Keywords - Domaini

Repeat, Signal

Phylogenomic databases

eggNOGiCOG2823.
HOGENOMiHOG000127831.
InParanoidiP0AFH8.
KOiK04065.
OMAiGYMDDSG.
OrthoDBiEOG6B3669.
PhylomeDBiP0AFH8.

Family and domain databases

InterProiIPR007055. BON_dom.
IPR014004. Transpt-assoc_nodulatn_dom_bac.
[Graphical view]
PfamiPF04972. BON. 2 hits.
[Graphical view]
SMARTiSM00749. BON. 2 hits.
[Graphical view]
PROSITEiPS50914. BON. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P0AFH8-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTMTRLKISK TLLAVMLTSA VATGSAYAEN NAQTTNESAG QKVDSSMNKV
60 70 80 90 100
GNFMDDSAIT AKVKAALVDH DNIKSTDISV KTDQKVVTLS GFVESQAQAE
110 120 130 140 150
EAVKVAKGVE GVTSVSDKLH VRDAKEGSVK GYAGDTATTS EIKAKLLADD
160 170 180 190 200
IVPSRHVKVE TTDGVVQLSG TVDSQAQSDR AESIAKAVDG VKSVKNDLKT

K
Length:201
Mass (Da):21,074
Last modified:December 20, 2005 - v1
Checksum:iBF74D4388D984B93
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
M89635 Unassigned DNA. Translation: AAA16621.1.
U14003 Genomic DNA. Translation: AAA97272.1.
U00096 Genomic DNA. Translation: AAC77329.1.
AP009048 Genomic DNA. Translation: BAE78364.1.
S67278 Genomic DNA. Translation: AAP14005.1.
PIRiA41899.
RefSeqiNP_418793.1. NC_000913.3.
YP_492505.1. NC_007779.1.

Genome annotation databases

EnsemblBacteriaiAAC77329; AAC77329; b4376.
BAE78364; BAE78364; BAE78364.
GeneIDi12933797.
948895.
KEGGiecj:Y75_p4259.
eco:b4376.
PATRICi32124362. VBIEscCol129921_4521.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
M89635 Unassigned DNA. Translation: AAA16621.1 .
U14003 Genomic DNA. Translation: AAA97272.1 .
U00096 Genomic DNA. Translation: AAC77329.1 .
AP009048 Genomic DNA. Translation: BAE78364.1 .
S67278 Genomic DNA. Translation: AAP14005.1 .
PIRi A41899.
RefSeqi NP_418793.1. NC_000913.3.
YP_492505.1. NC_007779.1.

3D structure databases

ProteinModelPortali P0AFH8.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

DIPi DIP-47968N.
IntActi P0AFH8. 3 interactions.
STRINGi 511145.b4376.

Proteomic databases

PaxDbi P0AFH8.
PRIDEi P0AFH8.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAC77329 ; AAC77329 ; b4376 .
BAE78364 ; BAE78364 ; BAE78364 .
GeneIDi 12933797.
948895.
KEGGi ecj:Y75_p4259.
eco:b4376.
PATRICi 32124362. VBIEscCol129921_4521.

Organism-specific databases

EchoBASEi EB1364.
EcoGenei EG11391. osmY.

Phylogenomic databases

eggNOGi COG2823.
HOGENOMi HOG000127831.
InParanoidi P0AFH8.
KOi K04065.
OMAi GYMDDSG.
OrthoDBi EOG6B3669.
PhylomeDBi P0AFH8.

Enzyme and pathway databases

BioCyci EcoCyc:EG11391-MONOMER.
ECOL316407:JW4338-MONOMER.

Miscellaneous databases

PROi P0AFH8.

Gene expression databases

Genevestigatori P0AFH8.

Family and domain databases

InterProi IPR007055. BON_dom.
IPR014004. Transpt-assoc_nodulatn_dom_bac.
[Graphical view ]
Pfami PF04972. BON. 2 hits.
[Graphical view ]
SMARTi SM00749. BON. 2 hits.
[Graphical view ]
PROSITEi PS50914. BON. 2 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "osmY, a new hyperosmotically inducible gene, encodes a periplasmic protein in Escherichia coli."
    Yim H.H., Villarejo M.
    J. Bacteriol. 174:3637-3644(1992) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA], PROTEIN SEQUENCE OF 29-43.
    Strain: K12.
  2. "Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes."
    Burland V.D., Plunkett G. III, Sofia H.J., Daniels D.L., Blattner F.R.
    Nucleic Acids Res. 23:2105-2119(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  4. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  5. "Complex transcriptional control of the sigma s-dependent stationary-phase-induced and osmotically regulated osmY (csi-5) gene suggests novel roles for Lrp, cyclic AMP (cAMP) receptor protein-cAMP complex, and integration host factor in the stationary-phase response of Escherichia coli."
    Lange R., Barth M., Hengge-Aronis R.
    J. Bacteriol. 175:7910-7917(1993) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-12.
  6. "Comparing the predicted and observed properties of proteins encoded in the genome of Escherichia coli K-12."
    Link A.J., Robison K., Church G.M.
    Electrophoresis 18:1259-1313(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: PROTEIN SEQUENCE OF 29-40.
    Strain: K12 / EMG2.
  7. Cited for: PROTEIN SEQUENCE OF 29-32.
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiOSMY_ECOLI
AccessioniPrimary (citable) accession number: P0AFH8
Secondary accession number(s): P27291, Q2M5U2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 20, 2005
Last sequence update: December 20, 2005
Last modified: October 29, 2014
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3