Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Lipopolysaccharide export system permease protein LptF

Gene

lptF

Organism
Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Part of the ABC transporter complex LptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane.By similarity

GO - Biological processi

Keywordsi

Biological processTransport

Enzyme and pathway databases

BioCyciECOL199310:C5362-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Lipopolysaccharide export system permease protein LptF
Gene namesi
Name:lptF
Ordered Locus Names:c5362
OrganismiEscherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Taxonomic identifieri199310 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000001410 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 15CytoplasmicSequence analysisAdd BLAST15
Transmembranei16 – 36HelicalSequence analysisAdd BLAST21
Topological domaini37 – 53PeriplasmicSequence analysisAdd BLAST17
Transmembranei54 – 74HelicalSequence analysisAdd BLAST21
Topological domaini75 – 100CytoplasmicSequence analysisAdd BLAST26
Transmembranei101 – 121HelicalSequence analysisAdd BLAST21
Topological domaini122 – 269PeriplasmicSequence analysisAdd BLAST148
Transmembranei270 – 290HelicalSequence analysisAdd BLAST21
Topological domaini291 – 295CytoplasmicSequence analysis5
Transmembranei296 – 316HelicalSequence analysisAdd BLAST21
Topological domaini317 – 327PeriplasmicSequence analysisAdd BLAST11
Transmembranei328 – 348HelicalSequence analysisAdd BLAST21
Topological domaini349 – 366CytoplasmicSequence analysisAdd BLAST18

GO - Cellular componenti

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001697731 – 366Lipopolysaccharide export system permease protein LptFAdd BLAST366

Interactioni

Subunit structurei

Component of the lipopolysaccharide transport and assembly complex. The LptBFG transporter is composed of two ATP-binding proteins (LptB) and two transmembrane proteins (LptF and LptG) (By similarity).By similarity

Protein-protein interaction databases

STRINGi199310.c5362

Structurei

3D structure databases

ProteinModelPortaliP0AF99
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the LptF/LptG family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4108M8S Bacteria
COG0795 LUCA
HOGENOMiHOG000283246
KOiK07091
OMAiSEMVIWF

Family and domain databases

InterProiView protein in InterPro
IPR030922 LptF
IPR005495 LptG/LptF_permease
PANTHERiPTHR33529 PTHR33529, 1 hit
PfamiView protein in Pfam
PF03739 YjgP_YjgQ, 1 hit
TIGRFAMsiTIGR04407 LptF_YjgP, 1 hit

Sequencei

Sequence statusi: Complete.

P0AF99-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIIIRYLVRE TLKSQLAILF ILLLIFFCQK LVRILGAAVD GDIPANLVLS
60 70 80 90 100
LLGLGVPEMA QLILPLSLFL GLLMTLGKLY TESEITVMHA CGLSKAVLVK
110 120 130 140 150
AAMILAVFTA IVAAVNVMWA GPWSSRHQDE VLAEAKANPG MAALAQGQFQ
160 170 180 190 200
QATNGSSVLF IESVDGSDFK DVFLAQIRPK GNARPSVVVA DSGHLTQLRD
210 220 230 240 250
GSQVVTLNQG TRFEGTALLR DFRITDFQDY QAIIGHQAVA LDPNDTDQMD
260 270 280 290 300
MRTLWNTDTD RARAELNWRI TLVFTVFMMA LMVVPLSVVN PRQGRVLSML
310 320 330 340 350
PAMLLYLLFF LIQTSLKSNG GKGKLDPTLW MWTVNLIYLA LAIVLNLWDT
360
VPVRRLRASF SRKGAV
Length:366
Mass (Da):40,358
Last modified:December 20, 2005 - v1
Checksum:i69A564AA22CBFFEA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014075 Genomic DNA Translation: AAN83784.1
RefSeqiWP_000584114.1, NC_004431.1

Genome annotation databases

EnsemblBacteriaiAAN83784; AAN83784; c5362
KEGGiecc:c5362

Similar proteinsi

Entry informationi

Entry nameiLPTF_ECOL6
AccessioniPrimary (citable) accession number: P0AF99
Secondary accession number(s): P39340
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 20, 2005
Last sequence update: December 20, 2005
Last modified: November 22, 2017
This is version 70 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health