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Protein

Uncharacterized protein YjcO

Gene

yjcO

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG11951-MONOMER.
ECOL316407:JW4039-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YjcO
Gene namesi
Name:yjcO
Ordered Locus Names:b4078, JW4039
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11951. yjcO.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1717Sequence analysisAdd
BLAST
Chaini18 – 229212Uncharacterized protein YjcOPRO_0000013939Add
BLAST

Proteomic databases

PaxDbiP0AF56.
PRIDEiP0AF56.

Interactioni

Protein-protein interaction databases

BioGridi4261972. 8 interactions.
STRINGi511145.b4078.

Structurei

3D structure databases

ProteinModelPortaliP0AF56.
SMRiP0AF56. Positions 21-227.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG41082ND. Bacteria.
COG0790. LUCA.
HOGENOMiHOG000126942.
InParanoidiP0AF56.
KOiK07126.
OMAiPKNDARA.
PhylomeDBiP0AF56.

Family and domain databases

Gene3Di1.25.40.10. 1 hit.
InterProiIPR006597. Sel1-like.
IPR011990. TPR-like_helical_dom.
[Graphical view]
PfamiPF08238. Sel1. 4 hits.
[Graphical view]
SMARTiSM00671. SEL1. 4 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P0AF56-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKKIIALMLF LTFFAHANDS EPGSQYLKAA EAGDRRAQYF LADSWFSSGD
60 70 80 90 100
LSKAEYWAQK AADSGDADAC ALLAQIKITN PVSLDYPQAK VLAEKAAQAG
110 120 130 140 150
SKEGEVTLAH ILVNTQAGKP DYPKAISLLE NASEDLENDS AVDAQMLLGL
160 170 180 190 200
IYANGVGIKA DDDKATWYFK RSSAISRTGY SEYWAGMMFL NGEEGFIEKN
210 220
KQKALHWLNL SCMEGFDTGC EEFEKLTNG
Length:229
Mass (Da):25,079
Last modified:December 20, 2005 - v1
Checksum:i54A4C7E738828E15
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00006 Genomic DNA. Translation: AAC43172.1.
U00096 Genomic DNA. Translation: AAD13461.1.
AP009048 Genomic DNA. Translation: BAE78080.1.
PIRiE65216.
RefSeqiNP_418502.1. NC_000913.3.
WP_000719886.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAD13461; AAD13461; b4078.
BAE78080; BAE78080; BAE78080.
GeneIDi948586.
KEGGiecj:JW4039.
eco:b4078.
PATRICi32123707. VBIEscCol129921_4202.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00006 Genomic DNA. Translation: AAC43172.1.
U00096 Genomic DNA. Translation: AAD13461.1.
AP009048 Genomic DNA. Translation: BAE78080.1.
PIRiE65216.
RefSeqiNP_418502.1. NC_000913.3.
WP_000719886.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP0AF56.
SMRiP0AF56. Positions 21-227.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261972. 8 interactions.
STRINGi511145.b4078.

Proteomic databases

PaxDbiP0AF56.
PRIDEiP0AF56.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAD13461; AAD13461; b4078.
BAE78080; BAE78080; BAE78080.
GeneIDi948586.
KEGGiecj:JW4039.
eco:b4078.
PATRICi32123707. VBIEscCol129921_4202.

Organism-specific databases

EchoBASEiEB1894.
EcoGeneiEG11951. yjcO.

Phylogenomic databases

eggNOGiENOG41082ND. Bacteria.
COG0790. LUCA.
HOGENOMiHOG000126942.
InParanoidiP0AF56.
KOiK07126.
OMAiPKNDARA.
PhylomeDBiP0AF56.

Enzyme and pathway databases

BioCyciEcoCyc:EG11951-MONOMER.
ECOL316407:JW4039-MONOMER.

Miscellaneous databases

PROiP0AF56.

Family and domain databases

Gene3Di1.25.40.10. 1 hit.
InterProiIPR006597. Sel1-like.
IPR011990. TPR-like_helical_dom.
[Graphical view]
PfamiPF08238. Sel1. 4 hits.
[Graphical view]
SMARTiSM00671. SEL1. 4 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYJCO_ECOLI
AccessioniPrimary (citable) accession number: P0AF56
Secondary accession number(s): P32713, Q2M6M6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 20, 2005
Last sequence update: December 20, 2005
Last modified: September 7, 2016
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.