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Protein

Uncharacterized protein YiiR

Gene

yiiR

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG11875-MONOMER.
ECOL316407:JW3892-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YiiR
Gene namesi
Name:yiiR
Ordered Locus Names:b3921, JW3892
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11875. yiiR.

Subcellular locationi

GO - Cellular componenti

  • integral component of membrane Source: InterPro
  • plasma membrane Source: EcoCyc
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 146146Uncharacterized protein YiiRPRO_0000169690Add
BLAST

Proteomic databases

PaxDbiP0AF34.

Interactioni

Protein-protein interaction databases

BioGridi4261770. 4 interactions.
IntActiP0AF34. 1 interaction.
STRINGi511145.b3921.

Structurei

3D structure databases

ProteinModelPortaliP0AF34.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4108VTS. Bacteria.
COG3152. LUCA.
HOGENOMiHOG000253107.
OMAiRDFWIWM.

Family and domain databases

InterProiIPR008523. DUF805.
[Graphical view]
PfamiPF05656. DUF805. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P0AF34-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTIQQWLFSF KGRIGRRDFW IWIGLWFAGM LVLFSLAGKN LLDIQTAAFC
60 70 80 90 100
LVCLLWPTAA VTVKRLHDRG RSGAWAFLMI VAWMLLAGNW AILPGVWQWA
110 120 130 140
VGRFVPTLIL VMMLIDLGAF VGTQGENKYG KDTQDVKYKA DNKSSN
Length:146
Mass (Da):16,542
Last modified:December 20, 2005 - v1
Checksum:iAB716795CA3EAE99
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L19201 Genomic DNA. Translation: AAB03053.1.
U00096 Genomic DNA. Translation: AAC76903.1.
AP009048 Genomic DNA. Translation: BAE77389.1.
PIRiS40864.
RefSeqiNP_418356.1. NC_000913.3.
WP_000155257.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC76903; AAC76903; b3921.
BAE77389; BAE77389; BAE77389.
GeneIDi948417.
KEGGiecj:JW3892.
eco:b3921.
PATRICi32123355. VBIEscCol129921_4038.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L19201 Genomic DNA. Translation: AAB03053.1.
U00096 Genomic DNA. Translation: AAC76903.1.
AP009048 Genomic DNA. Translation: BAE77389.1.
PIRiS40864.
RefSeqiNP_418356.1. NC_000913.3.
WP_000155257.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP0AF34.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261770. 4 interactions.
IntActiP0AF34. 1 interaction.
STRINGi511145.b3921.

Proteomic databases

PaxDbiP0AF34.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC76903; AAC76903; b3921.
BAE77389; BAE77389; BAE77389.
GeneIDi948417.
KEGGiecj:JW3892.
eco:b3921.
PATRICi32123355. VBIEscCol129921_4038.

Organism-specific databases

EchoBASEiEB1821.
EcoGeneiEG11875. yiiR.

Phylogenomic databases

eggNOGiENOG4108VTS. Bacteria.
COG3152. LUCA.
HOGENOMiHOG000253107.
OMAiRDFWIWM.

Enzyme and pathway databases

BioCyciEcoCyc:EG11875-MONOMER.
ECOL316407:JW3892-MONOMER.

Miscellaneous databases

PROiP0AF34.

Family and domain databases

InterProiIPR008523. DUF805.
[Graphical view]
PfamiPF05656. DUF805. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYIIR_ECOLI
AccessioniPrimary (citable) accession number: P0AF34
Secondary accession number(s): P32161, Q2M8L7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 20, 2005
Last sequence update: December 20, 2005
Last modified: September 7, 2016
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.