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Protein

Glycolate oxidase subunit GlcD

Gene

glcD

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Cofactori

FADCurated

GO - Molecular functioni

  • flavin adenine dinucleotide binding Source: InterPro
  • glycolate dehydrogenase activity Source: EcoCyc
  • glycolate oxidase activity Source: InterPro

GO - Biological processi

  • cellular response to DNA damage stimulus Source: EcoliWiki
  • glycolate catabolic process Source: EcoCyc

Keywordsi

Molecular functionOxidoreductase
LigandFAD, Flavoprotein

Enzyme and pathway databases

BioCyciEcoCyc:G7545-MONOMER
MetaCyc:G7545-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Glycolate oxidase subunit GlcD
Gene namesi
Name:glcD
Synonyms:gox, yghM
Ordered Locus Names:b2979, JW2946
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12997 glcD

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001281811 – 499Glycolate oxidase subunit GlcDAdd BLAST499

Proteomic databases

PaxDbiP0AEP9
PRIDEiP0AEP9

Interactioni

Protein-protein interaction databases

BioGridi4262368, 16 interactors
IntActiP0AEP9, 3 interactors
STRINGi316385.ECDH10B_3156

Structurei

3D structure databases

ProteinModelPortaliP0AEP9
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini52 – 230FAD-binding PCMH-typePROSITE-ProRule annotationAdd BLAST179

Sequence similaritiesi

Phylogenomic databases

eggNOGiENOG4105CQB Bacteria
COG0277 LUCA
HOGENOMiHOG000230998
InParanoidiP0AEP9
KOiK00104
OMAiTPRTCGE
PhylomeDBiP0AEP9

Family and domain databases

Gene3Di1.10.45.10, 1 hit
InterProiView protein in InterPro
IPR016166 FAD-bd_2
IPR036318 FAD-bd_2-like_sf
IPR016164 FAD-linked_Oxase-like_C
IPR004113 FAD-linked_oxidase_C
IPR004490 GlcD
IPR006094 Oxid_FAD_bind_N
IPR016171 Vanillyl_alc_oxidase_C-sub2
PfamiView protein in Pfam
PF02913 FAD-oxidase_C, 1 hit
PF01565 FAD_binding_4, 1 hit
SUPFAMiSSF55103 SSF55103, 1 hit
SSF56176 SSF56176, 1 hit
TIGRFAMsiTIGR00387 glcD, 1 hit
PROSITEiView protein in PROSITE
PS51387 FAD_PCMH, 1 hit

Sequencei

Sequence statusi: Complete.

P0AEP9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSILYEERLD GALPDVDRTS VLMALREHVP GLEILHTDEE IIPYECDGLS
60 70 80 90 100
AYRTRPLLVV LPKQMEQVTA ILAVCHRLRV PVVTRGAGTG LSGGALPLEK
110 120 130 140 150
GVLLVMARFK EILDINPVGR RARVQPGVRN LAISQAVAPH NLYYAPDPSS
160 170 180 190 200
QIACSIGGNV AENAGGVHCL KYGLTVHNLL KIEVQTLDGE ALTLGSDALD
210 220 230 240 250
SPGFDLLALF TGSEGMLGVT TEVTVKLLPK PPVARVLLAS FDSVEKAGLA
260 270 280 290 300
VGDIIANGII PGGLEMMDNL SIRAAEDFIH AGYPVDAEAI LLCELDGVES
310 320 330 340 350
DVQEDCERVN DILLKAGATD VRLAQDEAER VRFWAGRKNA FPAVGRISPD
360 370 380 390 400
YYCMDGTIPR RALPGVLEGI ARLSQQYDLR VANVFHAGDG NMHPLILFDA
410 420 430 440 450
NEPGEFARAE ELGGKILELC VEVGGSISGE HGIGREKINQ MCAQFNSDEI
460 470 480 490
TTFHAVKAAF DPDGLLNPGK NIPTLHRCAE FGAMHVHHGH LPFPELERF
Length:499
Mass (Da):53,812
Last modified:December 20, 2005 - v1
Checksum:i2D850E109DD1BA55
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L43490 Genomic DNA Translation: AAB02530.1
U28377 Genomic DNA Translation: AAA69146.1
U00096 Genomic DNA Translation: AAC76015.1
AP009048 Genomic DNA Translation: BAE77040.1
PIRiA65084
RefSeqiNP_417453.1, NC_000913.3
WP_000026117.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC76015; AAC76015; b2979
BAE77040; BAE77040; BAE77040
GeneIDi947353
KEGGiecj:JW2946
eco:b2979
PATRICifig|1411691.4.peg.3751

Similar proteinsi

Entry informationi

Entry nameiGLCD_ECOLI
AccessioniPrimary (citable) accession number: P0AEP9
Secondary accession number(s): P52075, Q2M9L6
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 20, 2005
Last sequence update: December 20, 2005
Last modified: March 28, 2018
This is version 93 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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