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Protein

Fimbriae Z protein

Gene

fimZ

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
DNA bindingi167 – 18620H-T-H motifPROSITE-ProRule annotationAdd
BLAST

GO - Molecular functioni

GO - Biological processi

  • phosphorelay signal transduction system Source: UniProtKB-KW
  • regulation of transcription, DNA-templated Source: UniProtKB-KW
  • response to drug Source: EcoCyc
  • transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulation, Two-component regulatory system

Keywords - Ligandi

DNA-binding

Enzyme and pathway databases

BioCyciEcoCyc:EG11103-MONOMER.
ECOL316407:JW5073-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Fimbriae Z protein
Gene namesi
Name:fimZ
Synonyms:ybcA
Ordered Locus Names:b0535, JW5073
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11103. fimZ.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 210210Fimbriae Z proteinPRO_0000081284Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei56 – 5614-aspartylphosphatePROSITE-ProRule annotation

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDbiP0AEL8.

Interactioni

Protein-protein interaction databases

BioGridi4260751. 4 interactions.
DIPiDIP-48119N.
IntActiP0AEL8. 4 interactions.
MINTiMINT-1275851.
STRINGi511145.b0535.

Structurei

3D structure databases

ProteinModelPortaliP0AEL8.
SMRiP0AEL8. Positions 5-210.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini5 – 121117Response regulatoryPROSITE-ProRule annotationAdd
BLAST
Domaini143 – 20866HTH luxR-typePROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 HTH luxR-type DNA-binding domain.PROSITE-ProRule annotation
Contains 1 response regulatory domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiENOG4108Q9V. Bacteria.
COG2197. LUCA.
HOGENOMiHOG000034813.
InParanoidiP0AEL8.
KOiK07688.
OMAiEILIMVA.
OrthoDBiEOG69GZGV.
PhylomeDBiP0AEL8.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR011006. CheY-like_superfamily.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR001789. Sig_transdc_resp-reg_receiver.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00196. GerE. 1 hit.
PF00072. Response_reg. 1 hit.
[Graphical view]
PRINTSiPR00038. HTHLUXR.
SMARTiSM00421. HTH_LUXR. 1 hit.
SM00448. REC. 1 hit.
[Graphical view]
SUPFAMiSSF46894. SSF46894. 1 hit.
SSF52172. SSF52172. 1 hit.
PROSITEiPS00622. HTH_LUXR_1. 1 hit.
PS50043. HTH_LUXR_2. 1 hit.
PS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P0AEL8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKPTSVIIMD THPIIRMSIE VLLQKNSELQ IVLKTDDYRI TIDYLRTRPV
60 70 80 90 100
DLIIMDIDLP GTDGFTFLKR IKQIQSTVKV LFLSSKSECF YAGRAIQAGA
110 120 130 140 150
NGFVSKCNDQ NDIFHAVQMI LSGYTFFPSE TLNYIKSNKC STNSSTVTVL
160 170 180 190 200
SNREVTILRY LVSGLSNKEI ADKLLLSNKT VSAHKSNIYG KLGLHSIVEL
210
IDYAKLYELI
Length:210
Mass (Da):23,664
Last modified:December 20, 2005 - v1
Checksum:iB5AD1F551028D54C
GO

Sequence cautioni

The sequence AAB40733.1 differs from that shown. Reason: Erroneous initiation. Curated
The sequence CAA35973.1 differs from that shown. Reason: Erroneous initiation. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X51662 Genomic DNA. Translation: CAA35973.1. Different initiation.
U82598 Genomic DNA. Translation: AAB40733.1. Different initiation.
U00096 Genomic DNA. Translation: AAC73637.1.
AP009048 Genomic DNA. Translation: BAE76312.1.
PIRiF64785. QQECY5.
RefSeqiNP_415068.1. NC_000913.3.
WP_000805428.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC73637; AAC73637; b0535.
BAE76312; BAE76312; BAE76312.
GeneIDi947079.
KEGGiecj:JW5073.
eco:b0535.
PATRICi32116230. VBIEscCol129921_0556.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X51662 Genomic DNA. Translation: CAA35973.1. Different initiation.
U82598 Genomic DNA. Translation: AAB40733.1. Different initiation.
U00096 Genomic DNA. Translation: AAC73637.1.
AP009048 Genomic DNA. Translation: BAE76312.1.
PIRiF64785. QQECY5.
RefSeqiNP_415068.1. NC_000913.3.
WP_000805428.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP0AEL8.
SMRiP0AEL8. Positions 5-210.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4260751. 4 interactions.
DIPiDIP-48119N.
IntActiP0AEL8. 4 interactions.
MINTiMINT-1275851.
STRINGi511145.b0535.

Proteomic databases

PaxDbiP0AEL8.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC73637; AAC73637; b0535.
BAE76312; BAE76312; BAE76312.
GeneIDi947079.
KEGGiecj:JW5073.
eco:b0535.
PATRICi32116230. VBIEscCol129921_0556.

Organism-specific databases

EchoBASEiEB1095.
EcoGeneiEG11103. fimZ.

Phylogenomic databases

eggNOGiENOG4108Q9V. Bacteria.
COG2197. LUCA.
HOGENOMiHOG000034813.
InParanoidiP0AEL8.
KOiK07688.
OMAiEILIMVA.
OrthoDBiEOG69GZGV.
PhylomeDBiP0AEL8.

Enzyme and pathway databases

BioCyciEcoCyc:EG11103-MONOMER.
ECOL316407:JW5073-MONOMER.

Miscellaneous databases

PROiP0AEL8.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR011006. CheY-like_superfamily.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR001789. Sig_transdc_resp-reg_receiver.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00196. GerE. 1 hit.
PF00072. Response_reg. 1 hit.
[Graphical view]
PRINTSiPR00038. HTHLUXR.
SMARTiSM00421. HTH_LUXR. 1 hit.
SM00448. REC. 1 hit.
[Graphical view]
SUPFAMiSSF46894. SSF46894. 1 hit.
SSF52172. SSF52172. 1 hit.
PROSITEiPS00622. HTH_LUXR_1. 1 hit.
PS50043. HTH_LUXR_2. 1 hit.
PS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Nucleotide sequence of the region encompassing the int gene of a cryptic prophage and the DNA Y gene flanked by a curved DNA sequence of Escherichia coli K12."
    Muramatsu S., Mizuno T.
    Mol. Gen. Genet. 220:325-328(1990) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: K12.
  2. "Sequence of minutes 4-25 of Escherichia coli."
    Chung E., Allen E., Araujo R., Aparicio A.M., Davis K., Duncan M., Federspiel N., Hyman R., Kalman S., Komp C., Kurdi O., Lew H., Lin D., Namath A., Oefner P., Roberts D., Schramm S., Davis R.W.
    Submitted (JAN-1997) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  4. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiFIMZ_ECOLI
AccessioniPrimary (citable) accession number: P0AEL8
Secondary accession number(s): P21502, P77080, Q2MBP4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 20, 2005
Last sequence update: December 20, 2005
Last modified: January 20, 2016
This is version 87 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.