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Protein

Response regulator UvrY

Gene

uvrY

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

Member of the two-component regulatory system UvrY/BarA involved in the regulation of carbon metabolism via the CsrA/CsrB regulatory system. UvrY activates the transcription of the untranslated csrB RNA and of barA, in an autoregulatory loop. Mediates the effects of CsrA on csrB RNA by BarA-dependent and BarA-independent mechanisms.

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi167 – 186H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

  • DNA binding Source: UniProtKB-KW
  • phosphorelay response regulator activity Source: EcoCyc

GO - Biological processi

Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation, Two-component regulatory system

Enzyme and pathway databases

BioCyciEcoCyc:EG11140-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Response regulator UvrY
Gene namesi
Name:uvrY
Synonyms:yecB
Ordered Locus Names:b1914, JW1899
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11140. uvrY.

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000812921 – 218Response regulator UvrYAdd BLAST218

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei544-aspartylphosphatePROSITE-ProRule annotation1

Post-translational modificationi

Phosphorylated and activated by BarA.

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDbiP0AED5.
PRIDEiP0AED5.

Expressioni

Inductioni

Expression is regulated by SidA.

Interactioni

Protein-protein interaction databases

BioGridi4261107. 99 interactors.
DIPiDIP-35922N.
IntActiP0AED5. 37 interactors.
MINTiMINT-1243107.
STRINGi316385.ECDH10B_2055.

Structurei

3D structure databases

ProteinModelPortaliP0AED5.
SMRiP0AED5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini3 – 119Response regulatoryPROSITE-ProRule annotationAdd BLAST117
Domaini143 – 208HTH luxR-typePROSITE-ProRule annotationAdd BLAST66

Phylogenomic databases

eggNOGiENOG4105WH1. Bacteria.
COG2197. LUCA.
HOGENOMiHOG000034813.
InParanoidiP0AED5.
KOiK07689.
PhylomeDBiP0AED5.

Family and domain databases

CDDicd06170. LuxR_C_like. 1 hit.
cd00156. REC. 1 hit.
Gene3Di1.10.10.10. 1 hit.
InterProiView protein in InterPro
IPR011006. CheY-like_superfamily.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR001789. Sig_transdc_resp-reg_receiver.
IPR000792. Tscrpt_reg_LuxR_C.
IPR036388. WH-like_DNA-bd_sf.
PfamiView protein in Pfam
PF00196. GerE. 1 hit.
PF00072. Response_reg. 1 hit.
PRINTSiPR00038. HTHLUXR.
SMARTiView protein in SMART
SM00421. HTH_LUXR. 1 hit.
SM00448. REC. 1 hit.
SUPFAMiSSF46894. SSF46894. 1 hit.
SSF52172. SSF52172. 1 hit.
PROSITEiView protein in PROSITE
PS00622. HTH_LUXR_1. 1 hit.
PS50043. HTH_LUXR_2. 1 hit.
PS50110. RESPONSE_REGULATORY. 1 hit.

Sequencei

Sequence statusi: Complete.

P0AED5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MINVLLVDDH ELVRAGIRRI LEDIKGIKVV GEASCGEDAV KWCRTNAVDV
60 70 80 90 100
VLMDMSMPGI GGLEATRKIA RSTADVKIIM LTVHTENPLP AKVMQAGAAG
110 120 130 140 150
YLSKGAAPQE VVSAIRSVYS GQRYIASDIA QQMALSQIEP EKTESPFASL
160 170 180 190 200
SERELQIMLM ITKGQKVNEI SEQLNLSPKT VNSYRYRMFS KLNIHGDVEL
210
THLAIRHGLC NAETLSSQ
Length:218
Mass (Da):23,893
Last modified:December 6, 2005 - v1
Checksum:i708E52D8BFA97716
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti8 – 9DD → MT in CAA27328 (PubMed:3515318).Curated2

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M24615 Genomic DNA. Translation: AAA24755.1.
U00096 Genomic DNA. Translation: AAC74981.1.
AP009048 Genomic DNA. Translation: BAA15734.1.
X05398 Genomic DNA. Translation: CAA28982.1.
X03691 Genomic DNA. Translation: CAA27328.1.
PIRiA26750. QQEC24.
RefSeqiNP_416424.1. NC_000913.3.
WP_000611335.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC74981; AAC74981; b1914.
BAA15734; BAA15734; BAA15734.
GeneIDi946424.
KEGGiecj:JW1899.
eco:b1914.
PATRICifig|1411691.4.peg.336.

Similar proteinsi

Entry informationi

Entry nameiUVRY_ECOLI
AccessioniPrimary (citable) accession number: P0AED5
Secondary accession number(s): P07027
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 1, 1988
Last sequence update: December 6, 2005
Last modified: October 25, 2017
This is version 99 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene