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Protein

Transcriptional activatory protein CaiF

Gene

caiF

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

Potential transcriptional activator of carnitine metabolism.

GO - Molecular functioni

  • transcription factor activity, sequence-specific DNA binding Source: EcoCyc

GO - Biological processi

  • carnitine metabolic process Source: EcoliWiki
  • regulation of transcription, DNA-templated Source: EcoCyc
  • transcription, DNA-templated Source: EcoCyc
Complete GO annotation...

Keywords - Molecular functioni

Activator

Keywords - Biological processi

Transcription, Transcription regulation

Enzyme and pathway databases

BioCyciEcoCyc:G6088-MONOMER.
ECOL316407:JW0033-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Transcriptional activatory protein CaiF
Gene namesi
Name:caiF
Ordered Locus Names:b0034, JW0033
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13451. caiF.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 131131Transcriptional activatory protein CaiFPRO_0000089284Add
BLAST

Proteomic databases

PaxDbiP0AE58.

Interactioni

Protein-protein interaction databases

BioGridi4263346. 6 interactions.
IntActiP0AE58. 10 interactions.
STRINGi511145.b0034.

Structurei

3D structure databases

ProteinModelPortaliP0AE58.
SMRiP0AE58. Positions 3-82.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4108XNW. Bacteria.
ENOG4111I8M. LUCA.
HOGENOMiHOG000116723.
KOiK08277.
OMAiTIPNQLE.

Family and domain databases

InterProiIPR020357. Tscrpt_reg_CaiF/GrlA.
[Graphical view]
PfamiPF07180. DUF1401. 1 hit.
[Graphical view]
ProDomiPD081346. Transcription_activatory_CaiF. 1 hit.
[Graphical view] [Entries sharing at least one domain]

Sequencei

Sequence statusi: Complete.

P0AE58-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MCEGYVEKPL YLLIAEWMMA ENRWVIAREI SIHFDIEHSK AVNTLTYILS
60 70 80 90 100
EVTEISCEVK MIPNKLEGRG CQCQRLVKVV DIDEQIYARL RNNSREKLVG
110 120 130
VRKTPRIPAV PLTELNREQK WQMMLSKSMR R
Length:131
Mass (Da):15,436
Last modified:December 6, 2005 - v1
Checksum:iD2315E9DEBF976BD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X80644 Genomic DNA. Translation: CAA56690.1.
U00096 Genomic DNA. Translation: AAC73145.2.
AP009048 Genomic DNA. Translation: BAE76036.1.
RefSeqiNP_414576.4. NC_000913.3.
WP_000333125.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC73145; AAC73145; b0034.
BAE76036; BAE76036; BAE76036.
GeneIDi944795.
KEGGiecj:JW0033.
eco:b0034.
PATRICi32115163. VBIEscCol129921_0033.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X80644 Genomic DNA. Translation: CAA56690.1.
U00096 Genomic DNA. Translation: AAC73145.2.
AP009048 Genomic DNA. Translation: BAE76036.1.
RefSeqiNP_414576.4. NC_000913.3.
WP_000333125.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP0AE58.
SMRiP0AE58. Positions 3-82.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4263346. 6 interactions.
IntActiP0AE58. 10 interactions.
STRINGi511145.b0034.

Proteomic databases

PaxDbiP0AE58.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC73145; AAC73145; b0034.
BAE76036; BAE76036; BAE76036.
GeneIDi944795.
KEGGiecj:JW0033.
eco:b0034.
PATRICi32115163. VBIEscCol129921_0033.

Organism-specific databases

EchoBASEiEB3224.
EcoGeneiEG13451. caiF.

Phylogenomic databases

eggNOGiENOG4108XNW. Bacteria.
ENOG4111I8M. LUCA.
HOGENOMiHOG000116723.
KOiK08277.
OMAiTIPNQLE.

Enzyme and pathway databases

BioCyciEcoCyc:G6088-MONOMER.
ECOL316407:JW0033-MONOMER.

Miscellaneous databases

PROiP0AE58.

Family and domain databases

InterProiIPR020357. Tscrpt_reg_CaiF/GrlA.
[Graphical view]
PfamiPF07180. DUF1401. 1 hit.
[Graphical view]
ProDomiPD081346. Transcription_activatory_CaiF. 1 hit.
[Graphical view] [Entries sharing at least one domain]
ProtoNetiSearch...

Entry informationi

Entry nameiCAIF_ECOLI
AccessioniPrimary (citable) accession number: P0AE58
Secondary accession number(s): P75622, Q2MCH0, Q47081
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 6, 2005
Last sequence update: December 6, 2005
Last modified: September 7, 2016
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.