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Protein

Transcriptional activatory protein CaiF

Gene

caiF

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Protein predictedi

Functioni

Potential transcriptional activator of carnitine metabolism.

GO - Molecular functioni

  • DNA binding transcription factor activity Source: EcoCyc

GO - Biological processi

  • carnitine metabolic process Source: EcoliWiki
  • regulation of transcription, DNA-templated Source: EcoCyc
  • transcription, DNA-templated Source: EcoCyc

Keywordsi

Molecular functionActivator
Biological processTranscription, Transcription regulation

Enzyme and pathway databases

BioCyciEcoCyc:G6088-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Transcriptional activatory protein CaiF
Gene namesi
Name:caiF
Ordered Locus Names:b0034, JW0033
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13451 caiF

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000892841 – 131Transcriptional activatory protein CaiFAdd BLAST131

Proteomic databases

PaxDbiP0AE58
PRIDEiP0AE58

Interactioni

Protein-protein interaction databases

BioGridi4263346, 6 interactors
IntActiP0AE58, 10 interactors
STRINGi316385.ECDH10B_0035

Structurei

3D structure databases

ProteinModelPortaliP0AE58
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4108XNW Bacteria
ENOG4111I8M LUCA
HOGENOMiHOG000116723
KOiK08277
OMAiLIADWVM

Family and domain databases

Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR020357 Tscrpt_reg_CaiF/GrlA
IPR036388 WH-like_DNA-bd_sf
PfamiView protein in Pfam
PF07180 CaiF_GrlA, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD081346 Transcription_activatory_CaiF, 1 hit

Sequencei

Sequence statusi: Complete.

P0AE58-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MCEGYVEKPL YLLIAEWMMA ENRWVIAREI SIHFDIEHSK AVNTLTYILS
60 70 80 90 100
EVTEISCEVK MIPNKLEGRG CQCQRLVKVV DIDEQIYARL RNNSREKLVG
110 120 130
VRKTPRIPAV PLTELNREQK WQMMLSKSMR R
Length:131
Mass (Da):15,436
Last modified:December 6, 2005 - v1
Checksum:iD2315E9DEBF976BD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X80644 Genomic DNA Translation: CAA56690.1
U00096 Genomic DNA Translation: AAC73145.2
AP009048 Genomic DNA Translation: BAE76036.1
RefSeqiNP_414576.4, NC_000913.3
WP_000333125.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC73145; AAC73145; b0034
BAE76036; BAE76036; BAE76036
GeneIDi944795
KEGGiecj:JW0033
eco:b0034
PATRICifig|1411691.4.peg.2249

Similar proteinsi

Entry informationi

Entry nameiCAIF_ECOLI
AccessioniPrimary (citable) accession number: P0AE58
Secondary accession number(s): P75622, Q2MCH0, Q47081
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 6, 2005
Last sequence update: December 6, 2005
Last modified: March 28, 2018
This is version 80 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
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