Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

UPF0057 membrane protein YqaE

Gene

yqaE

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G7396-MONOMER.
ECOL316407:JW2641-MONOMER.

Protein family/group databases

TCDBi9.B.12.2.1. the sensitivity to sodium or salt stress-induced hydrophobic peptide (sna) family.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0057 membrane protein YqaE
Gene namesi
Name:yqaE
Ordered Locus Names:b2666, JW2641
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG14313. yqaE.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei1 – 21HelicalSequence analysisAdd BLAST21
Transmembranei23 – 43HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001939971 – 52UPF0057 membrane protein YqaEAdd BLAST52

Proteomic databases

PaxDbiP0AE42.
PRIDEiP0AE42.

Interactioni

Protein-protein interaction databases

BioGridi4259219. 104 interactors.
STRINGi511145.b2666.

Structurei

3D structure databases

ProteinModelPortaliP0AE42.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0057 (PMP3) family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105VPI. Bacteria.
COG0401. LUCA.
HOGENOMiHOG000274029.
InParanoidiP0AE42.
OMAiMELIRII.
PhylomeDBiP0AE42.

Family and domain databases

InterProiIPR000612. PMP3.
[Graphical view]
PANTHERiPTHR21659. PTHR21659. 1 hit.
PfamiPF01679. Pmp3. 1 hit.
[Graphical view]
PROSITEiPS01309. UPF0057. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P0AE42-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGFWRIVITI ILPPLGVLLG KGFGWAFIIN ILLTLLGYIP GLIHAFWVQT

RD
Length:52
Mass (Da):5,865
Last modified:December 6, 2005 - v1
Checksum:i35AF407B378B8225
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC75713.1.
AP009048 Genomic DNA. Translation: BAA16529.1.
PIRiC65046.
RefSeqiNP_417152.1. NC_000913.3.
WP_000508177.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC75713; AAC75713; b2666.
BAA16529; BAA16529; BAA16529.
GeneIDi947138.
KEGGiecj:JW2641.
eco:b2666.
PATRICi32120722. VBIEscCol129921_2758.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC75713.1.
AP009048 Genomic DNA. Translation: BAA16529.1.
PIRiC65046.
RefSeqiNP_417152.1. NC_000913.3.
WP_000508177.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP0AE42.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4259219. 104 interactors.
STRINGi511145.b2666.

Protein family/group databases

TCDBi9.B.12.2.1. the sensitivity to sodium or salt stress-induced hydrophobic peptide (sna) family.

Proteomic databases

PaxDbiP0AE42.
PRIDEiP0AE42.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC75713; AAC75713; b2666.
BAA16529; BAA16529; BAA16529.
GeneIDi947138.
KEGGiecj:JW2641.
eco:b2666.
PATRICi32120722. VBIEscCol129921_2758.

Organism-specific databases

EchoBASEiEB4060.
EcoGeneiEG14313. yqaE.

Phylogenomic databases

eggNOGiENOG4105VPI. Bacteria.
COG0401. LUCA.
HOGENOMiHOG000274029.
InParanoidiP0AE42.
OMAiMELIRII.
PhylomeDBiP0AE42.

Enzyme and pathway databases

BioCyciEcoCyc:G7396-MONOMER.
ECOL316407:JW2641-MONOMER.

Miscellaneous databases

PROiP0AE42.

Family and domain databases

InterProiIPR000612. PMP3.
[Graphical view]
PANTHERiPTHR21659. PTHR21659. 1 hit.
PfamiPF01679. Pmp3. 1 hit.
[Graphical view]
PROSITEiPS01309. UPF0057. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYQAE_ECOLI
AccessioniPrimary (citable) accession number: P0AE42
Secondary accession number(s): P77240
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 6, 2005
Last sequence update: December 6, 2005
Last modified: November 2, 2016
This is version 78 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.