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Protein

Uncharacterized protein YqiB

Gene

yqiB

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G7580-MONOMER.
ECOL316407:JW3001-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YqiB
Gene namesi
Name:yqiB
Synonyms:yzzH
Ordered Locus Names:b3033, JW3001
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12185. yqiB.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 140140Uncharacterized protein YqiBPRO_0000169413Add
BLAST

Proteomic databases

PaxDbiP0ADU7.

Interactioni

Protein-protein interaction databases

BioGridi4262396. 61 interactions.
IntActiP0ADU7. 7 interactions.
STRINGi511145.b3033.

Structurei

3D structure databases

ProteinModelPortaliP0ADU7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4108SX3. Bacteria.
COG3151. LUCA.
HOGENOMiHOG000283494.
InParanoidiP0ADU7.
KOiK09920.
OMAiNAAMHQP.
OrthoDBiEOG6FBWZW.

Family and domain databases

InterProiIPR009659. DUF1249.
[Graphical view]
PfamiPF06853. DUF1249. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P0ADU7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKRYTPDFPE MMRLCEMNFS QLRRLLPRND APGETVSYQV ANAQYRLTIV
60 70 80 90 100
ESTRYTTLVT IEQTAPAISY WSLPSMTVRL YHDAMVAEVC SSQQIFRFKA
110 120 130 140
RYDYPNKKLH QRDEKHQINQ FLADWLRYCL AHGAMAIPVY
Length:140
Mass (Da):16,548
Last modified:December 6, 2005 - v1
Checksum:iC627A52C8053072A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D16557 Genomic DNA. Translation: BAA03988.1.
U28377 Genomic DNA. Translation: AAA69201.1.
U00096 Genomic DNA. Translation: AAC76069.1.
AP009048 Genomic DNA. Translation: BAE77089.1.
PIRiG65090.
RefSeqiNP_417505.1. NC_000913.3.
WP_000833393.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC76069; AAC76069; b3033.
BAE77089; BAE77089; BAE77089.
GeneIDi947518.
KEGGiecj:JW3001.
eco:b3033.
PATRICi32121476. VBIEscCol129921_3125.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D16557 Genomic DNA. Translation: BAA03988.1.
U28377 Genomic DNA. Translation: AAA69201.1.
U00096 Genomic DNA. Translation: AAC76069.1.
AP009048 Genomic DNA. Translation: BAE77089.1.
PIRiG65090.
RefSeqiNP_417505.1. NC_000913.3.
WP_000833393.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP0ADU7.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4262396. 61 interactions.
IntActiP0ADU7. 7 interactions.
STRINGi511145.b3033.

Proteomic databases

PaxDbiP0ADU7.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC76069; AAC76069; b3033.
BAE77089; BAE77089; BAE77089.
GeneIDi947518.
KEGGiecj:JW3001.
eco:b3033.
PATRICi32121476. VBIEscCol129921_3125.

Organism-specific databases

EchoBASEiEB2102.
EcoGeneiEG12185. yqiB.

Phylogenomic databases

eggNOGiENOG4108SX3. Bacteria.
COG3151. LUCA.
HOGENOMiHOG000283494.
InParanoidiP0ADU7.
KOiK09920.
OMAiNAAMHQP.
OrthoDBiEOG6FBWZW.

Enzyme and pathway databases

BioCyciEcoCyc:G7580-MONOMER.
ECOL316407:JW3001-MONOMER.

Miscellaneous databases

PROiP0ADU7.

Family and domain databases

InterProiIPR009659. DUF1249.
[Graphical view]
PfamiPF06853. DUF1249. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Identification of the cpdA gene encoding cyclic 3',5'-adenosine monophosphate phosphodiesterase in Escherichia coli."
    Imamura R., Yamanaka K., Ogura T., Hiraga S., Fujita N., Ishihama A., Niki H.
    J. Biol. Chem. 271:25423-25429(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: K12.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYQIB_ECOLI
AccessioniPrimary (citable) accession number: P0ADU7
Secondary accession number(s): P36652, Q2M9G7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 6, 2005
Last sequence update: December 6, 2005
Last modified: April 13, 2016
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.