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Protein

Uncharacterized protein YggN

Gene

yggN

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Biological processi

  • single-species biofilm formation Source: EcoCyc
Complete GO annotation...

Enzyme and pathway databases

BioCyciEcoCyc:EG12705-MONOMER.
ECOL316407:JW2925-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YggN
Gene namesi
Name:yggN
Ordered Locus Names:b2958, JW2925
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12705. yggN.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 239239Uncharacterized protein YggNPRO_0000169371Add
BLAST

Proteomic databases

EPDiP0ADS9.
PaxDbiP0ADS9.
PRIDEiP0ADS9.

Interactioni

Protein-protein interaction databases

BioGridi4259244. 7 interactions.
IntActiP0ADS9. 2 interactions.
STRINGi511145.b2958.

Structurei

3D structure databases

ProteinModelPortaliP0ADS9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4105K33. Bacteria.
ENOG410XSUS. LUCA.
HOGENOMiHOG000124469.
OMAiNPLQAMM.
OrthoDBiEOG651STT.

Family and domain databases

InterProiIPR021307. DUF2884.
[Graphical view]
PfamiPF11101. DUF2884. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P0ADS9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMRKMLLAAA LSVTAMTAHA DYQCSVTPRD DVIVSPQTVQ VKGENGNLVI
60 70 80 90 100
TPDGNVMYNG KQYSLNAAQR EQAKDYQAEL RSTLPWIDEG AKSRVEKARI
110 120 130 140 150
ALDKIIVQEM GESSKMRSRL TKLDAQLKEQ MNRIIETRSD GLTFHYKAID
160 170 180 190 200
QVRAEGQQLV NQAMGGILQD SINEMGAKAV LKSGGNPLQN VLGSLGGLQS
210 220 230
SIQTEWKKQE KDFQQFGKDV CSRVVTLEDS RKALVGNLK
Length:239
Mass (Da):26,429
Last modified:December 6, 2005 - v1
Checksum:i0D0B47E72674705F
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti195 – 1951L → LGSL (PubMed:2407723).Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U28377 Genomic DNA. Translation: AAA69125.1.
U00096 Genomic DNA. Translation: AAC75995.1.
AP009048 Genomic DNA. Translation: BAE77021.1.
M34277 Genomic DNA. No translation available.
M34234 Genomic DNA. No translation available.
PIRiE65081.
RefSeqiNP_417433.1. NC_000913.3.
WP_000984796.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC75995; AAC75995; b2958.
BAE77021; BAE77021; BAE77021.
GeneIDi947453.
KEGGiecj:JW2925.
eco:b2958.
PATRICi32121328. VBIEscCol129921_3052.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U28377 Genomic DNA. Translation: AAA69125.1.
U00096 Genomic DNA. Translation: AAC75995.1.
AP009048 Genomic DNA. Translation: BAE77021.1.
M34277 Genomic DNA. No translation available.
M34234 Genomic DNA. No translation available.
PIRiE65081.
RefSeqiNP_417433.1. NC_000913.3.
WP_000984796.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP0ADS9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4259244. 7 interactions.
IntActiP0ADS9. 2 interactions.
STRINGi511145.b2958.

Proteomic databases

EPDiP0ADS9.
PaxDbiP0ADS9.
PRIDEiP0ADS9.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC75995; AAC75995; b2958.
BAE77021; BAE77021; BAE77021.
GeneIDi947453.
KEGGiecj:JW2925.
eco:b2958.
PATRICi32121328. VBIEscCol129921_3052.

Organism-specific databases

EchoBASEiEB2567.
EcoGeneiEG12705. yggN.

Phylogenomic databases

eggNOGiENOG4105K33. Bacteria.
ENOG410XSUS. LUCA.
HOGENOMiHOG000124469.
OMAiNPLQAMM.
OrthoDBiEOG651STT.

Enzyme and pathway databases

BioCyciEcoCyc:EG12705-MONOMER.
ECOL316407:JW2925-MONOMER.

Miscellaneous databases

PROiP0ADS9.

Family and domain databases

InterProiIPR021307. DUF2884.
[Graphical view]
PfamiPF11101. DUF2884. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  3. "Analysis of the Escherichia coli gene encoding L-asparaginase II, ansB, and its regulation by cyclic AMP receptor and FNR proteins."
    Jennings M.P., Beacham I.R.
    J. Bacteriol. 172:1491-1498(1990) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 175-239.
  4. "L-asparaginase II of Escherichia coli K-12: cloning, mapping and sequencing of the ansB gene."
    Bonthron D.T.
    Gene 91:101-105(1990) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 185-239.
    Strain: K12.
  5. "Detection of new genes in a bacterial genome using Markov models for three gene classes."
    Borodovsky M., McIninch J., Koonin E.V., Rudd K.E., Medigue C., Danchin A.
    Nucleic Acids Res. 23:3554-3562(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiYGGN_ECOLI
AccessioniPrimary (citable) accession number: P0ADS9
Secondary accession number(s): P46143, Q2M9N5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 6, 2005
Last sequence update: December 6, 2005
Last modified: March 16, 2016
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.