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Protein

Protein YihD

Gene

yihD

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG11830-MONOMER.
ECOL316407:JW3830-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Protein YihD
Gene namesi
Name:yihD
Ordered Locus Names:b3858, JW3830
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11830. yihD.

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: EcoCyc
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 8989Protein YihDPRO_0000169670Add
BLAST

Proteomic databases

PaxDbiP0ADP9.
PRIDEiP0ADP9.

Interactioni

Protein-protein interaction databases

BioGridi4262623. 8 interactions.
IntActiP0ADP9. 2 interactions.
STRINGi511145.b3858.

Structurei

3D structure databases

ProteinModelPortaliP0ADP9.
SMRiP0ADP9. Positions 1-89.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

To H.influenzae HI_0845.Curated

Phylogenomic databases

eggNOGiENOG4105PC1. Bacteria.
COG3084. LUCA.
HOGENOMiHOG000284974.
InParanoidiP0ADP9.
KOiK09896.
OMAiKDEMIPG.

Family and domain databases

InterProiIPR009383. DUF1040.
[Graphical view]
PfamiPF06288. DUF1040. 1 hit.
[Graphical view]
ProDomiPD029038. DUF1040. 1 hit.
[Graphical view] [Entries sharing at least one domain]

Sequencei

Sequence statusi: Complete.

P0ADP9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKCKRLNEVI ELLQPAWQKE PDLNLLQFLQ KLAKESGFDG ELADLTDDIL
60 70 80
IYHLKMRDSA KDAVIPGLQK DYEEDFKTAL LRARGVIKE
Length:89
Mass (Da):10,273
Last modified:December 6, 2005 - v1
Checksum:i307E75C1D700DF92
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L19201 Genomic DNA. Translation: AAB02993.1.
U00096 Genomic DNA. Translation: AAC76856.1.
AP009048 Genomic DNA. Translation: BAE77450.1.
PIRiS40804.
RefSeqiNP_418295.1. NC_000913.3.
WP_001295263.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC76856; AAC76856; b3858.
BAE77450; BAE77450; BAE77450.
GeneIDi948348.
KEGGiecj:JW3830.
eco:b3858.
PATRICi32123213. VBIEscCol129921_3967.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L19201 Genomic DNA. Translation: AAB02993.1.
U00096 Genomic DNA. Translation: AAC76856.1.
AP009048 Genomic DNA. Translation: BAE77450.1.
PIRiS40804.
RefSeqiNP_418295.1. NC_000913.3.
WP_001295263.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP0ADP9.
SMRiP0ADP9. Positions 1-89.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4262623. 8 interactions.
IntActiP0ADP9. 2 interactions.
STRINGi511145.b3858.

Proteomic databases

PaxDbiP0ADP9.
PRIDEiP0ADP9.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC76856; AAC76856; b3858.
BAE77450; BAE77450; BAE77450.
GeneIDi948348.
KEGGiecj:JW3830.
eco:b3858.
PATRICi32123213. VBIEscCol129921_3967.

Organism-specific databases

EchoBASEiEB1777.
EcoGeneiEG11830. yihD.

Phylogenomic databases

eggNOGiENOG4105PC1. Bacteria.
COG3084. LUCA.
HOGENOMiHOG000284974.
InParanoidiP0ADP9.
KOiK09896.
OMAiKDEMIPG.

Enzyme and pathway databases

BioCyciEcoCyc:EG11830-MONOMER.
ECOL316407:JW3830-MONOMER.

Miscellaneous databases

PROiP0ADP9.

Family and domain databases

InterProiIPR009383. DUF1040.
[Graphical view]
PfamiPF06288. DUF1040. 1 hit.
[Graphical view]
ProDomiPD029038. DUF1040. 1 hit.
[Graphical view] [Entries sharing at least one domain]
ProtoNetiSearch...

Entry informationi

Entry nameiYIHD_ECOLI
AccessioniPrimary (citable) accession number: P0ADP9
Secondary accession number(s): P32126, Q2M8F6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 6, 2005
Last sequence update: December 6, 2005
Last modified: September 7, 2016
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.