Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Uncharacterized lipoprotein YifL

Gene

yifL

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:MONOMER0-2693.
ECOL316407:JW3781-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized lipoprotein YifL
Gene namesi
Name:yifL
Ordered Locus Names:b4558, JW3781
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12353. yifL.

Subcellular locationi

  • Cell membrane PROSITE-ProRule annotation; Lipid-anchor PROSITE-ProRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1919PROSITE-ProRule annotationAdd
BLAST
Chaini20 – 6748Uncharacterized lipoprotein YifLPRO_0000013931Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Lipidationi20 – 201N-palmitoyl cysteinePROSITE-ProRule annotation
Lipidationi20 – 201S-diacylglycerol cysteinePROSITE-ProRule annotation

Keywords - PTMi

Lipoprotein, Palmitate

Proteomic databases

PaxDbiP0ADN6.
PRIDEiP0ADN6.

Interactioni

Protein-protein interaction databases

BioGridi4262612. 96 interactions.
IntActiP0ADN6. 1 interaction.
STRINGi511145.b4558.

Structurei

3D structure databases

ProteinModelPortaliP0ADN6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG4105S7Z. Bacteria.
COG5567. LUCA.
HOGENOMiHOG000219138.
OMAiFRSLAVM.
OrthoDBiEOG6W19Q7.

Family and domain databases

InterProiIPR032831. LPAM_2.
[Graphical view]
PfamiPF13627. LPAM_2. 1 hit.
[Graphical view]
PROSITEiPS51257. PROKAR_LIPOPROTEIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P0ADN6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKNVFKALTV LLTLFSLTGC GLKGPLYFPP ADKNAPPPTK PVETQTQSTV
60
PDKNDRATGD GPSQVNY
Length:67
Mass (Da):7,177
Last modified:December 6, 2005 - v1
Checksum:i4A52CF48A555A7F9
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti60 – 678DGPSQVNY → MVHPR (Ref. 1) Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X66782 Genomic DNA. No translation available.
M87049 Genomic DNA. No translation available.
U00096 Genomic DNA. Translation: ABD18710.1.
AP009048 Genomic DNA. Translation: BAE77492.1.
RefSeqiWP_000799889.1. NZ_LN832404.1.
YP_588473.1. NC_000913.3.

Genome annotation databases

EnsemblBacteriaiABD18710; ABD18710; b4558.
BAE77492; BAE77492; BAE77492.
GeneIDi1450304.
KEGGiecj:JW3781.
eco:b4558.
PATRICi32123117. VBIEscCol129921_3924.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X66782 Genomic DNA. No translation available.
M87049 Genomic DNA. No translation available.
U00096 Genomic DNA. Translation: ABD18710.1.
AP009048 Genomic DNA. Translation: BAE77492.1.
RefSeqiWP_000799889.1. NZ_LN832404.1.
YP_588473.1. NC_000913.3.

3D structure databases

ProteinModelPortaliP0ADN6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4262612. 96 interactions.
IntActiP0ADN6. 1 interaction.
STRINGi511145.b4558.

Proteomic databases

PaxDbiP0ADN6.
PRIDEiP0ADN6.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABD18710; ABD18710; b4558.
BAE77492; BAE77492; BAE77492.
GeneIDi1450304.
KEGGiecj:JW3781.
eco:b4558.
PATRICi32123117. VBIEscCol129921_3924.

Organism-specific databases

EchoBASEiEB2257.
EcoGeneiEG12353. yifL.

Phylogenomic databases

eggNOGiENOG4105S7Z. Bacteria.
COG5567. LUCA.
HOGENOMiHOG000219138.
OMAiFRSLAVM.
OrthoDBiEOG6W19Q7.

Enzyme and pathway databases

BioCyciEcoCyc:MONOMER0-2693.
ECOL316407:JW3781-MONOMER.

Miscellaneous databases

PROiP0ADN6.

Family and domain databases

InterProiIPR032831. LPAM_2.
[Graphical view]
PfamiPF13627. LPAM_2. 1 hit.
[Graphical view]
PROSITEiPS51257. PROKAR_LIPOPROTEIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Glaser P., Sismeiro O., Danchin A.
    Submitted (JUN-1992) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: K12.
  2. "Analysis of the Escherichia coli genome: DNA sequence of the region from 84.5 to 86.5 minutes."
    Daniels D.L., Plunkett G. III, Burland V.D., Blattner F.R.
    Science 257:771-778(1992) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  4. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  5. "Intrinsic and extrinsic approaches for detecting genes in a bacterial genome."
    Borodovsky M., Rudd K.E., Koonin E.V.
    Nucleic Acids Res. 22:4756-4767(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiYIFL_ECOLI
AccessioniPrimary (citable) accession number: P0ADN6
Secondary accession number(s): P39166
, Q2EEU0, Q2M8B4, Q8X3Y5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 6, 2005
Last sequence update: December 6, 2005
Last modified: January 20, 2016
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.