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Protein

Inner membrane protein YidG

Gene

yidG

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG11695-MONOMER.
ECOL316407:JW3651-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Inner membrane protein YidG
Gene namesi
Name:yidG
Ordered Locus Names:b3675, JW3651
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11695. yidG.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini1 – 2121CytoplasmicSequence analysisAdd
BLAST
Transmembranei22 – 3918HelicalSequence analysisAdd
BLAST
Topological domaini40 – 489PeriplasmicSequence analysis
Transmembranei49 – 6820HelicalSequence analysisAdd
BLAST
Topological domaini69 – 9022CytoplasmicSequence analysisAdd
BLAST
Transmembranei91 – 11323HelicalSequence analysisAdd
BLAST
Topological domaini114 – 1207PeriplasmicSequence analysis

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: EcoCyc
Complete GO annotation...

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 120120Inner membrane protein YidGPRO_0000169624Add
BLAST

Proteomic databases

PaxDbiP0ADL6.

Interactioni

Protein-protein interaction databases

BioGridi4261241. 11 interactions.
STRINGi511145.b3675.

Structurei

3D structure databases

ProteinModelPortaliP0ADL6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105JP4. Bacteria.
ENOG4111NSM. LUCA.
HOGENOMiHOG000126304.
OMAiWRYTRSR.
OrthoDBiEOG6M9F2M.

Family and domain databases

InterProiIPR003807. DUF202.
IPR020264. Uncharacterised_YidG.
[Graphical view]
PfamiPF02656. DUF202. 1 hit.
[Graphical view]
ProDomiPD277113. Inner_membrane_protein_yidG. 1 hit.
[Graphical view] [Entries sharing at least one domain]

Sequencei

Sequence statusi: Complete.

P0ADL6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPDSRKARRI ADPGLQPERT SLAWFRTMLG YGALMALAIK HNWHQAGMLF
60 70 80 90 100
WISIGILAIV ALILWHYTRN RNLMDVTNSD FSQFHVVRDK FLISLAVLSL
110 120
AILFAVTHIH QLIVFIERVA
Length:120
Mass (Da):13,768
Last modified:December 6, 2005 - v1
Checksum:i50532CE251F5D2E7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L10328 Genomic DNA. Translation: AAA62027.1.
U00096 Genomic DNA. Translation: AAC76698.1.
AP009048 Genomic DNA. Translation: BAE77618.1.
PIRiD65169.
RefSeqiNP_418131.1. NC_000913.3.
WP_001113432.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC76698; AAC76698; b3675.
BAE77618; BAE77618; BAE77618.
GeneIDi948191.
KEGGiecj:JW3651.
eco:b3675.
PATRICi32122841. VBIEscCol129921_3796.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L10328 Genomic DNA. Translation: AAA62027.1.
U00096 Genomic DNA. Translation: AAC76698.1.
AP009048 Genomic DNA. Translation: BAE77618.1.
PIRiD65169.
RefSeqiNP_418131.1. NC_000913.3.
WP_001113432.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP0ADL6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261241. 11 interactions.
STRINGi511145.b3675.

Proteomic databases

PaxDbiP0ADL6.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC76698; AAC76698; b3675.
BAE77618; BAE77618; BAE77618.
GeneIDi948191.
KEGGiecj:JW3651.
eco:b3675.
PATRICi32122841. VBIEscCol129921_3796.

Organism-specific databases

EchoBASEiEB1646.
EcoGeneiEG11695. yidG.

Phylogenomic databases

eggNOGiENOG4105JP4. Bacteria.
ENOG4111NSM. LUCA.
HOGENOMiHOG000126304.
OMAiWRYTRSR.
OrthoDBiEOG6M9F2M.

Enzyme and pathway databases

BioCyciEcoCyc:EG11695-MONOMER.
ECOL316407:JW3651-MONOMER.

Miscellaneous databases

PROiP0ADL6.

Family and domain databases

InterProiIPR003807. DUF202.
IPR020264. Uncharacterised_YidG.
[Graphical view]
PfamiPF02656. DUF202. 1 hit.
[Graphical view]
ProDomiPD277113. Inner_membrane_protein_yidG. 1 hit.
[Graphical view] [Entries sharing at least one domain]
ProtoNetiSearch...

Publicationsi

  1. "DNA sequence and analysis of 136 kilobases of the Escherichia coli genome: organizational symmetry around the origin of replication."
    Burland V.D., Plunkett G. III, Daniels D.L., Blattner F.R.
    Genomics 16:551-561(1993) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  4. "Global topology analysis of the Escherichia coli inner membrane proteome."
    Daley D.O., Rapp M., Granseth E., Melen K., Drew D., von Heijne G.
    Science 308:1321-1323(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: TOPOLOGY [LARGE SCALE ANALYSIS].
    Strain: K12 / MG1655 / ATCC 47076.

Entry informationi

Entry nameiYIDG_ECOLI
AccessioniPrimary (citable) accession number: P0ADL6
Secondary accession number(s): P31444, Q2M7Y8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 6, 2005
Last sequence update: December 6, 2005
Last modified: January 20, 2016
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.