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Protein

Uncharacterized protein YibL

Gene

yibL

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG11964-MONOMER.
ECOL316407:JW3577-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YibL
Gene namesi
Name:yibL
Ordered Locus Names:b3602, JW3577
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11964. yibL.

Subcellular locationi

GO - Cellular componenti

  • cytosol Source: EcoCyc
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 120120Uncharacterized protein YibLPRO_0000169608Add
BLAST

Proteomic databases

PaxDbiP0ADK8.
PRIDEiP0ADK8.

Interactioni

Protein-protein interaction databases

BioGridi4262560. 5 interactions.
DIPiDIP-35909N.
IntActiP0ADK8. 47 interactions.
MINTiMINT-1237619.
STRINGi511145.b3602.

Structurei

3D structure databases

ProteinModelPortaliP0ADK8.
SMRiP0ADK8. Positions 1-120.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4108YYI. Bacteria.
ENOG4111N40. LUCA.
HOGENOMiHOG000293716.
KOiK14762.
OMAiRIDTCRR.
OrthoDBiEOG6TJ816.

Family and domain databases

InterProiIPR021230. DUF2810.
[Graphical view]
PfamiPF10928. DUF2810. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P0ADK8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKEVEKNEIK RLSDRLDAIR HQQADLSLVE AADKYAELEK EKATLEAEIA
60 70 80 90 100
RLREVHSQKL SKEAQKLMKM PFQRAITKKE QADMGKLKKS VRGLVVVHPM
110 120
TALGREMGLQ EMTGFSKTAF
Length:120
Mass (Da):13,696
Last modified:December 6, 2005 - v1
Checksum:i72B2313BFA1F098C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X51359 Genomic DNA. No translation available.
L13970 Unassigned DNA. No translation available.
U00039 Genomic DNA. Translation: AAB18579.1.
U00096 Genomic DNA. Translation: AAC76626.1.
AP009048 Genomic DNA. Translation: BAE77690.1.
U03845 Genomic DNA. Translation: AAA92663.1.
PIRiS47823.
RefSeqiNP_418059.1. NC_000913.3.
WP_000665680.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC76626; AAC76626; b3602.
BAE77690; BAE77690; BAE77690.
GeneIDi948115.
KEGGiecj:JW3577.
eco:b3602.
PATRICi32122689. VBIEscCol129921_3721.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X51359 Genomic DNA. No translation available.
L13970 Unassigned DNA. No translation available.
U00039 Genomic DNA. Translation: AAB18579.1.
U00096 Genomic DNA. Translation: AAC76626.1.
AP009048 Genomic DNA. Translation: BAE77690.1.
U03845 Genomic DNA. Translation: AAA92663.1.
PIRiS47823.
RefSeqiNP_418059.1. NC_000913.3.
WP_000665680.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP0ADK8.
SMRiP0ADK8. Positions 1-120.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4262560. 5 interactions.
DIPiDIP-35909N.
IntActiP0ADK8. 47 interactions.
MINTiMINT-1237619.
STRINGi511145.b3602.

Proteomic databases

PaxDbiP0ADK8.
PRIDEiP0ADK8.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC76626; AAC76626; b3602.
BAE77690; BAE77690; BAE77690.
GeneIDi948115.
KEGGiecj:JW3577.
eco:b3602.
PATRICi32122689. VBIEscCol129921_3721.

Organism-specific databases

EchoBASEiEB1907.
EcoGeneiEG11964. yibL.

Phylogenomic databases

eggNOGiENOG4108YYI. Bacteria.
ENOG4111N40. LUCA.
HOGENOMiHOG000293716.
KOiK14762.
OMAiRIDTCRR.
OrthoDBiEOG6TJ816.

Enzyme and pathway databases

BioCyciEcoCyc:EG11964-MONOMER.
ECOL316407:JW3577-MONOMER.

Miscellaneous databases

PROiP0ADK8.

Family and domain databases

InterProiIPR021230. DUF2810.
[Graphical view]
PfamiPF10928. DUF2810. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Corrected sequence of the mannitol (mtl) operon in Escherichia coli."
    Jaiang W., Wu L.F., Tomich J., Saier M.H. Jr., Nichaus W.G.
    Mol. Microbiol. 4:2003-2006(1990) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: K12.
  2. "Three overlapping lct genes involved in L-lactate utilization by Escherichia coli."
    Dong J.M., Taylor J.S., Latour D.J., Iuchi S., Lin E.C.C.
    J. Bacteriol. 175:6671-6678(1993) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: K12.
  3. "Analysis of the Escherichia coli genome. V. DNA sequence of the region from 76.0 to 81.5 minutes."
    Sofia H.J., Burland V., Daniels D.L., Plunkett G. III, Blattner F.R.
    Nucleic Acids Res. 22:2576-2586(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  4. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  5. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  6. "The mannitol repressor (MtlR) of Escherichia coli."
    Figge R.M., Ramseier T.M., Saier M.H. Jr.
    J. Bacteriol. 176:840-847(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-24.
    Strain: K12.
  7. "The Escherichia coli GTPase CgtAE is involved in late steps of large ribosome assembly."
    Jiang M., Datta K., Walker A., Strahler J., Bagamasbad P., Andrews P.C., Maddock J.R.
    J. Bacteriol. 188:6757-6770(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: IDENTIFICATION BY MASS SPECTROMETRY, SUBCELLULAR LOCATION, ASSOCIATION WITH THE 50S RIBOSOMAL SUBUNIT.
    Strain: K12 / MG1655 / ATCC 47076.

Entry informationi

Entry nameiYIBL_ECOLI
AccessioniPrimary (citable) accession number: P0ADK8
Secondary accession number(s): P36564, Q2M7R6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 6, 2005
Last sequence update: December 6, 2005
Last modified: January 20, 2016
This is version 76 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.