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Protein

Inner membrane protein YiaA

Gene

yiaA

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

  • cellular response to DNA damage stimulus Source: EcoliWiki
Complete GO annotation...

Enzyme and pathway databases

BioCyciEcoCyc:EG11186-MONOMER.
ECOL316407:JW3534-MONOMER.

Protein family/group databases

TCDBi9.B.44.1.1. the yiaa-yiab (yiaab) family.

Names & Taxonomyi

Protein namesi
Recommended name:
Inner membrane protein YiaA
Gene namesi
Name:yiaA
Ordered Locus Names:b3562, JW3534
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11186. yiaA.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini1 – 1212CytoplasmicSequence analysisAdd
BLAST
Transmembranei13 – 3220HelicalSequence analysisAdd
BLAST
Topological domaini33 – 419PeriplasmicSequence analysis
Transmembranei42 – 5918HelicalSequence analysisAdd
BLAST
Topological domaini60 – 7112CytoplasmicSequence analysisAdd
BLAST
Transmembranei72 – 9423HelicalSequence analysisAdd
BLAST
Topological domaini95 – 984PeriplasmicSequence analysis
Transmembranei99 – 12123HelicalSequence analysisAdd
BLAST
Topological domaini122 – 14524CytoplasmicSequence analysisAdd
BLAST

GO - Cellular componenti

  • integral component of plasma membrane Source: GO_Central
  • plasma membrane Source: EcoCyc
Complete GO annotation...

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 145145Inner membrane protein YiaAPRO_0000169587Add
BLAST

Proteomic databases

PaxDbiP0ADJ8.

Interactioni

Protein-protein interaction databases

BioGridi4261726. 8 interactions.
STRINGi511145.b3562.

Structurei

3D structure databases

ProteinModelPortaliP0ADJ8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4108Z12. Bacteria.
COG4682. LUCA.
HOGENOMiHOG000256697.
OMAiQKNVRDS.

Family and domain databases

InterProiIPR008024. YiaAB.
[Graphical view]
PfamiPF05360. YiaAB. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P0ADJ8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDNKISTYSP AFSIVSWIAL VGGIVTYLLG LWNAEMQLNE KGYYFAVLVL
60 70 80 90 100
GLFSAASYQK TVRDKYEGIP TTSIYYMTCL TVFIISVALL MVGLWNATLL
110 120 130 140
LSEKGFYGLA FFLSLFGAVA VQKNIRDAGI NPPKETQVTQ EEYSE
Length:145
Mass (Da):16,123
Last modified:December 6, 2005 - v1
Checksum:i579C7073D3AEC5D5
GO

Sequence cautioni

The sequence AAB18539 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
K01996 Genomic DNA. Translation: AAA24770.1.
X04691 Genomic DNA. Translation: CAB46441.1.
U00039 Genomic DNA. Translation: AAB18539.1. Different initiation.
U00096 Genomic DNA. Translation: AAC76586.2.
AP009048 Genomic DNA. Translation: BAE77731.1.
RefSeqiNP_418019.4. NC_000913.3.
WP_001296808.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC76586; AAC76586; b3562.
BAE77731; BAE77731; BAE77731.
GeneIDi948078.
KEGGiecj:JW3534.
eco:b3562.
PATRICi32122600. VBIEscCol129921_3677.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
K01996 Genomic DNA. Translation: AAA24770.1.
X04691 Genomic DNA. Translation: CAB46441.1.
U00039 Genomic DNA. Translation: AAB18539.1. Different initiation.
U00096 Genomic DNA. Translation: AAC76586.2.
AP009048 Genomic DNA. Translation: BAE77731.1.
RefSeqiNP_418019.4. NC_000913.3.
WP_001296808.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP0ADJ8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261726. 8 interactions.
STRINGi511145.b3562.

Protein family/group databases

TCDBi9.B.44.1.1. the yiaa-yiab (yiaab) family.

Proteomic databases

PaxDbiP0ADJ8.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC76586; AAC76586; b3562.
BAE77731; BAE77731; BAE77731.
GeneIDi948078.
KEGGiecj:JW3534.
eco:b3562.
PATRICi32122600. VBIEscCol129921_3677.

Organism-specific databases

EchoBASEiEB1172.
EcoGeneiEG11186. yiaA.

Phylogenomic databases

eggNOGiENOG4108Z12. Bacteria.
COG4682. LUCA.
HOGENOMiHOG000256697.
OMAiQKNVRDS.

Enzyme and pathway databases

BioCyciEcoCyc:EG11186-MONOMER.
ECOL316407:JW3534-MONOMER.

Miscellaneous databases

PROiP0ADJ8.

Family and domain databases

InterProiIPR008024. YiaAB.
[Graphical view]
PfamiPF05360. YiaAB. 2 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYIAA_ECOLI
AccessioniPrimary (citable) accession number: P0ADJ8
Secondary accession number(s): P11287, P76715, Q2M7M5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 6, 2005
Last sequence update: December 6, 2005
Last modified: September 7, 2016
This is version 79 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.