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Protein

Putative transcription factor YjjQ

Gene

yjjQ

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi171 – 190H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

  • regulation of transcription, DNA-templated Source: UniProtKB-KW
  • response to methylglyoxal Source: EcoCyc
  • transcription, DNA-templated Source: UniProtKB-KW

Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation

Enzyme and pathway databases

BioCyciEcoCyc:G7947-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Putative transcription factor YjjQ
Gene namesi
Name:yjjQ
Ordered Locus Names:b4365, JW4329
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12593 yjjQ

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001698141 – 241Putative transcription factor YjjQAdd BLAST241

Proteomic databases

PaxDbiP0ADD7
PRIDEiP0ADD7

Expressioni

Inductioni

Repressed by H-NS, activated by LeuO. Member of the yjjQ-bglJ operon.2 Publications

Interactioni

Subunit structurei

May form homodimers.

Protein-protein interaction databases

BioGridi4262776, 161 interactors
STRINGi316385.ECDH10B_4521

Structurei

3D structure databases

ProteinModelPortaliP0ADD7
SMRiP0ADD7
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini147 – 212HTH luxR-typePROSITE-ProRule annotationAdd BLAST66

Phylogenomic databases

eggNOGiENOG4108N8T Bacteria
ENOG4110JED LUCA
HOGENOMiHOG000127585
OMAiAKGWGIN
PhylomeDBiP0ADD7

Family and domain databases

CDDicd06170 LuxR_C_like, 1 hit
InterProiView protein in InterPro
IPR016032 Sig_transdc_resp-reg_C-effctor
IPR000792 Tscrpt_reg_LuxR_C
PfamiView protein in Pfam
PF00196 GerE, 1 hit
SMARTiView protein in SMART
SM00421 HTH_LUXR, 1 hit
SUPFAMiSSF46894 SSF46894, 1 hit
PROSITEiView protein in PROSITE
PS50043 HTH_LUXR_2, 1 hit

Sequencei

Sequence statusi: Complete.

P0ADD7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLPGCCKNGI VISKIPVMQA GLKEVMRTHF PEYEIISSAS AEDLTLLQLR
60 70 80 90 100
RSGLVIADLA GESEDPRSVC EHYYSLISQY REIHWVFMVS RSWYSQAVEL
110 120 130 140 150
LMCPTATLLS DVEPIENLVK TVRSGNTHAE RISAMLTSPA MTETHDFSYR
160 170 180 190 200
SVILTLSERK VLRLLGKGWG INQIASLLKK SNKTISAQKN SAMRRLAIHS
210 220 230 240
NAEMYAWINS AQGARELNLP SVYGDAAEWN TAELRREMSH S
Length:241
Mass (Da):27,032
Last modified:December 6, 2005 - v1
Checksum:i83DF457B46AE230F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U14003 Genomic DNA Translation: AAA97264.1
U00096 Genomic DNA Translation: AAC77321.1
AP009048 Genomic DNA Translation: BAE78355.1
PIRiS56592
RefSeqiNP_418785.1, NC_000913.3
WP_000936635.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC77321; AAC77321; b4365
BAE78355; BAE78355; BAE78355
GeneIDi948896
KEGGiecj:JW4329
eco:b4365
PATRICifig|1411691.4.peg.2321

Entry informationi

Entry nameiYJJQ_ECOLI
AccessioniPrimary (citable) accession number: P0ADD7
Secondary accession number(s): P39403, Q2M5V1
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 6, 2005
Last sequence update: December 6, 2005
Last modified: March 28, 2018
This is version 93 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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