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Protein

Inner membrane protein YjjP

Gene

yjjP

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G7946-MONOMER.
ECOL316407:JW5796-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Inner membrane protein YjjP
Gene namesi
Name:yjjP
Ordered Locus Names:b4364, JW5796
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12592. yjjP.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini1 – 117117PeriplasmicSequence analysisAdd
BLAST
Transmembranei118 – 13821HelicalSequence analysisAdd
BLAST
Topological domaini139 – 16830CytoplasmicSequence analysisAdd
BLAST
Transmembranei169 – 18921HelicalSequence analysisAdd
BLAST
Topological domaini190 – 1945PeriplasmicSequence analysis
Transmembranei195 – 21521HelicalSequence analysisAdd
BLAST
Topological domaini216 – 22914CytoplasmicSequence analysisAdd
BLAST
Transmembranei230 – 25021HelicalSequence analysisAdd
BLAST
Topological domaini251 – 2566PeriplasmicSequence analysis

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: EcoCyc
Complete GO annotation...

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 256256Inner membrane protein YjjPPRO_0000169811Add
BLAST

Proteomic databases

PaxDbiP0ADD5.
PRIDEiP0ADD5.

Expressioni

Inductioni

Has 2 promoters, 1 of which is repressed by H-NS. Activated by LeuO. A monocistronic operon.2 Publications

Interactioni

Protein-protein interaction databases

BioGridi4259591. 12 interactions.
STRINGi511145.b4364.

Structurei

3D structure databases

ProteinModelPortaliP0ADD5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

To H.influenzae HI_0108.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105DWK. Bacteria.
COG2966. LUCA.
HOGENOMiHOG000282060.
InParanoidiP0ADD5.
OMAiITRLCIQ.
PhylomeDBiP0ADD5.

Family and domain databases

InterProiIPR010619. ThrE.
[Graphical view]
PfamiPF06738. ThrE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P0ADD5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQTEQQRAVT RLCIQCGLFL LQHGAESALV DELSSRLGRA LGMDSVESSI
60 70 80 90 100
SSNAIVLTTI KDGQCLTSTR KNHDRGINMH VVTEVQHIVI LAEHHLLDYK
110 120 130 140 150
GVEKRFSQIQ PLRYPRWLVA LMVGLSCACF CKLNNGGWDG AVITFFASTT
160 170 180 190 200
AMYIRQLLAQ RHLHPQINFC LTAFAATTIS GLLLQLPTFS NTPTIAMAAS
210 220 230 240 250
VLLLVPGFPL INAVADMFKG HINTGLARWA IASLLTLATC VGVVMALTIW

GLRGWV
Length:256
Mass (Da):28,001
Last modified:December 6, 2005 - v1
Checksum:iFC7FBE8ED0BE340A
GO

Sequence cautioni

The sequence AAA97263 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U14003 Genomic DNA. Translation: AAA97263.1. Different initiation.
U00096 Genomic DNA. Translation: AAC77320.2.
AP009048 Genomic DNA. Translation: BAE78354.1.
PIRiS56591.
RefSeqiNP_418784.4. NC_000913.3.
WP_001338213.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC77320; AAC77320; b4364.
BAE78354; BAE78354; BAE78354.
GeneIDi948812.
KEGGiecj:JW5796.
eco:b4364.
PATRICi32124336. VBIEscCol129921_4511.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U14003 Genomic DNA. Translation: AAA97263.1. Different initiation.
U00096 Genomic DNA. Translation: AAC77320.2.
AP009048 Genomic DNA. Translation: BAE78354.1.
PIRiS56591.
RefSeqiNP_418784.4. NC_000913.3.
WP_001338213.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP0ADD5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4259591. 12 interactions.
STRINGi511145.b4364.

Proteomic databases

PaxDbiP0ADD5.
PRIDEiP0ADD5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC77320; AAC77320; b4364.
BAE78354; BAE78354; BAE78354.
GeneIDi948812.
KEGGiecj:JW5796.
eco:b4364.
PATRICi32124336. VBIEscCol129921_4511.

Organism-specific databases

EchoBASEiEB2477.
EcoGeneiEG12592. yjjP.

Phylogenomic databases

eggNOGiENOG4105DWK. Bacteria.
COG2966. LUCA.
HOGENOMiHOG000282060.
InParanoidiP0ADD5.
OMAiITRLCIQ.
PhylomeDBiP0ADD5.

Enzyme and pathway databases

BioCyciEcoCyc:G7946-MONOMER.
ECOL316407:JW5796-MONOMER.

Miscellaneous databases

PROiP0ADD5.

Family and domain databases

InterProiIPR010619. ThrE.
[Graphical view]
PfamiPF06738. ThrE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYJJP_ECOLI
AccessioniPrimary (citable) accession number: P0ADD5
Secondary accession number(s): P39402, Q2M5V2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 6, 2005
Last sequence update: December 6, 2005
Last modified: September 7, 2016
This is version 76 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.