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Protein

Uncharacterized protein YjiX

Gene

yjiX

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Biological processi

  • cellular response to DNA damage stimulus Source: EcoliWiki
Complete GO annotation...

Enzyme and pathway databases

BioCyciEcoCyc:G7941-MONOMER.
ECOL316407:JW4316-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YjiX
Gene namesi
Name:yjiX
Ordered Locus Names:b4353, JW4316
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12585. yjiX.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001698001 – 67Uncharacterized protein YjiXAdd BLAST67

Proteomic databases

PaxDbiP0ADC8.
PRIDEiP0ADC8.

Interactioni

Protein-protein interaction databases

BioGridi4262772. 15 interactors.
IntActiP0ADC8. 1 interactor.
STRINGi511145.b4353.

Structurei

3D structure databases

ProteinModelPortaliP0ADC8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

To E.coli YbdD.Curated

Phylogenomic databases

eggNOGiENOG4105VCD. Bacteria.
COG2879. LUCA.
HOGENOMiHOG000239011.
InParanoidiP0ADC8.
OMAiQEARYGS.
PhylomeDBiP0ADC8.

Family and domain databases

InterProiIPR007423. Sel_put.
[Graphical view]
PfamiPF04328. Sel_put. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P0ADC8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFGNLGQAKK YLGQAAKMLI GIPDYDNYVE HMKTNHPDKP YMSYEEFFRE
60
RQNARYGGDG KGGMRCC
Length:67
Mass (Da):7,729
Last modified:December 6, 2005 - v1
Checksum:iD98E90A1A843219E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U14003 Genomic DNA. Translation: AAA97250.1.
U00096 Genomic DNA. Translation: AAC77309.1.
AP009048 Genomic DNA. Translation: BAE78343.1.
PIRiS56579.
RefSeqiNP_418773.1. NC_000913.3.
WP_000467859.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC77309; AAC77309; b4353.
BAE78343; BAE78343; BAE78343.
GeneIDi949090.
KEGGiecj:JW4316.
eco:b4353.
PATRICi32124312. VBIEscCol129921_4499.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U14003 Genomic DNA. Translation: AAA97250.1.
U00096 Genomic DNA. Translation: AAC77309.1.
AP009048 Genomic DNA. Translation: BAE78343.1.
PIRiS56579.
RefSeqiNP_418773.1. NC_000913.3.
WP_000467859.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP0ADC8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4262772. 15 interactors.
IntActiP0ADC8. 1 interactor.
STRINGi511145.b4353.

Proteomic databases

PaxDbiP0ADC8.
PRIDEiP0ADC8.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC77309; AAC77309; b4353.
BAE78343; BAE78343; BAE78343.
GeneIDi949090.
KEGGiecj:JW4316.
eco:b4353.
PATRICi32124312. VBIEscCol129921_4499.

Organism-specific databases

EchoBASEiEB2471.
EcoGeneiEG12585. yjiX.

Phylogenomic databases

eggNOGiENOG4105VCD. Bacteria.
COG2879. LUCA.
HOGENOMiHOG000239011.
InParanoidiP0ADC8.
OMAiQEARYGS.
PhylomeDBiP0ADC8.

Enzyme and pathway databases

BioCyciEcoCyc:G7941-MONOMER.
ECOL316407:JW4316-MONOMER.

Miscellaneous databases

PROiP0ADC8.

Family and domain databases

InterProiIPR007423. Sel_put.
[Graphical view]
PfamiPF04328. Sel_put. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYJIX_ECOLI
AccessioniPrimary (citable) accession number: P0ADC8
Secondary accession number(s): P39395, Q2M5W3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 6, 2005
Last sequence update: December 6, 2005
Last modified: November 2, 2016
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.