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Protein

Phenylalanyl--tRNA ligase operon leader peptide

Gene

pheM

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Biological processi

  • regulation of transcription, DNA-templated Source: EcoCyc
Complete GO annotation...

Keywords - Molecular functioni

Leader peptide

Enzyme and pathway databases

BioCyciEcoCyc:EG11272-MONOMER.
ECOL316407:JW1705-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Phenylalanyl--tRNA ligase operon leader peptide
Alternative name(s):
PheST attenuator peptide
Gene namesi
Name:pheM
Synonyms:phtL
Ordered Locus Names:b1715, JW1705
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG11272. pheM.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Peptidei1 – 1414Phenylalanyl--tRNA ligase operon leader peptidePRO_0000043981Add
BLAST

Sequencei

Sequence statusi: Complete.

Length:14
Mass (Da):1,762
Last modified:April 1, 1988 - v1
Checksum:i7D31C48E0060F0D4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M10423 Genomic DNA. Translation: AAA23961.1.
V00291 Genomic DNA. Translation: CAA23563.1.
M13251 Genomic DNA. Translation: AAA24333.1.
U00096 Genomic DNA. Translation: AAC74785.1.
AP009048 Genomic DNA. Translation: BAE76506.1.
PIRiS11551. LFECFS.
RefSeqiNP_416230.1. NC_000913.3.

Genome annotation databases

EnsemblBacteriaiAAC74785; AAC74785; b1715.
BAE76506; BAE76506; BAE76506.
GeneIDi947212.
KEGGiecj:JW1705.
eco:b1715.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M10423 Genomic DNA. Translation: AAA23961.1.
V00291 Genomic DNA. Translation: CAA23563.1.
M13251 Genomic DNA. Translation: AAA24333.1.
U00096 Genomic DNA. Translation: AAC74785.1.
AP009048 Genomic DNA. Translation: BAE76506.1.
PIRiS11551. LFECFS.
RefSeqiNP_416230.1. NC_000913.3.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74785; AAC74785; b1715.
BAE76506; BAE76506; BAE76506.
GeneIDi947212.
KEGGiecj:JW1705.
eco:b1715.

Organism-specific databases

EchoBASEiEB1251.
EcoGeneiEG11272. pheM.

Enzyme and pathway databases

BioCyciEcoCyc:EG11272-MONOMER.
ECOL316407:JW1705-MONOMER.

Miscellaneous databases

PROiP0AD74.

Family and domain databases

ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Attenuation control of the Escherichia coli phenylalanyl-tRNA synthetase operon."
    Springer M., Mayaux J.-F., Fayat G., Plumbridge J.A., Graffe M., Blanquet S., Grunberg-Manago M.
    J. Mol. Biol. 181:467-478(1985) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  2. "Escherichia coli phenylalanyl-tRNA synthetase operon region. Evidence for an attenuation mechanism. Identification of the gene for the ribosomal protein L20."
    Fayat G., Mayaux J.-F., Sacerdot C., Fromant M., Springer M., Grunberg-Manago M., Blanquet S.
    J. Mol. Biol. 171:239-261(1983) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  3. "IS4 transposition in the attenuator region of the Escherichia coli pheS,T operon."
    Mayaux J.-F., Springer M., Graffe M., Fromant M., Fayat G.
    Gene 30:137-146(1984) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  4. "Open reading frames in the control regions of the phenylalanyl-tRNA synthetase operon of E. coli."
    Springer M., Graffe M., Mayaux J.-F., Dardel F., Fayat G., Blanquet S., Grunberg-Manago M.
    Biochimie 69:1065-1070(1987) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  5. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  6. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiLPF2_ECOLI
AccessioniPrimary (citable) accession number: P0AD74
Secondary accession number(s): P06985, Q2MB50
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 1, 1988
Last sequence update: April 1, 1988
Last modified: November 11, 2015
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.