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Protein

Uncharacterized protein YpeB

Gene

ypeB

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:MONOMER0-2684.
ECOL316407:JW5877-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YpeB
Gene namesi
Name:ypeB
Ordered Locus Names:b4546, JW5877
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG14366. ypeB.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001692271 – 72Uncharacterized protein YpeBAdd BLAST72

Proteomic databases

PaxDbiP0AD40.
PRIDEiP0AD40.

Interactioni

Protein-protein interaction databases

BioGridi4259671. 7 interactors.
STRINGi511145.b4546.

Structurei

3D structure databases

ProteinModelPortaliP0AD40.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4105VRT. Bacteria.
COG3530. LUCA.
HOGENOMiHOG000266648.
InParanoidiP0AD40.
KOiK09954.
OMAiTMPYGKY.

Family and domain databases

InterProiIPR024530. QSregVF_b.
[Graphical view]
PfamiPF12843. QSregVF_b. 1 hit.
[Graphical view]
ProDomiPD056452. Uncharacterised_YpeB. 1 hit.
[Graphical view] [Entries sharing at least one domain]

Sequencei

Sequence statusi: Complete.

P0AD40-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEKEQLIEIA NTIMPFGKYK GRRLIDLPEE YLLWFARKDE FPAGKLGELM
60 70
QITLLIKTEG LTQLVQPLKR PL
Length:72
Mass (Da):8,415
Last modified:November 22, 2005 - v1
Checksum:iEB48248AAE37AB8C
GO

Sequence cautioni

The sequence M24278 differs from that shown. Reason: Frameshift at position 45.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M24278 Genomic DNA. No translation available.
U00096 Genomic DNA. Translation: ABD18696.1.
AP009048 Genomic DNA. Translation: BAE76710.1.
RefSeqiWP_000410201.1. NZ_LN832404.1.
YP_588464.1. NC_000913.3.

Genome annotation databases

EnsemblBacteriaiABD18696; ABD18696; b4546.
BAE76710; BAE76710; BAE76710.
GeneIDi1450285.
KEGGiecj:JW5877.
eco:b4546.
PATRICi32120203. VBIEscCol129921_2504.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M24278 Genomic DNA. No translation available.
U00096 Genomic DNA. Translation: ABD18696.1.
AP009048 Genomic DNA. Translation: BAE76710.1.
RefSeqiWP_000410201.1. NZ_LN832404.1.
YP_588464.1. NC_000913.3.

3D structure databases

ProteinModelPortaliP0AD40.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4259671. 7 interactors.
STRINGi511145.b4546.

Proteomic databases

PaxDbiP0AD40.
PRIDEiP0AD40.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABD18696; ABD18696; b4546.
BAE76710; BAE76710; BAE76710.
GeneIDi1450285.
KEGGiecj:JW5877.
eco:b4546.
PATRICi32120203. VBIEscCol129921_2504.

Organism-specific databases

EchoBASEiEB4110.
EcoGeneiEG14366. ypeB.

Phylogenomic databases

eggNOGiENOG4105VRT. Bacteria.
COG3530. LUCA.
HOGENOMiHOG000266648.
InParanoidiP0AD40.
KOiK09954.
OMAiTMPYGKY.

Enzyme and pathway databases

BioCyciEcoCyc:MONOMER0-2684.
ECOL316407:JW5877-MONOMER.

Miscellaneous databases

PROiP0AD40.

Family and domain databases

InterProiIPR024530. QSregVF_b.
[Graphical view]
PfamiPF12843. QSregVF_b. 1 hit.
[Graphical view]
ProDomiPD056452. Uncharacterised_YpeB. 1 hit.
[Graphical view] [Entries sharing at least one domain]
ProtoNetiSearch...

Entry informationi

Entry nameiYPEB_ECOLI
AccessioniPrimary (citable) accession number: P0AD40
Secondary accession number(s): P56604, Q2EET1, Q2MAJ6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 22, 2005
Last sequence update: November 22, 2005
Last modified: November 2, 2016
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.