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Protein

Putative uncharacterized protein YfdO

Gene

yfdO

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein uncertaini

Functioni

GO - Biological processi

  • response to oxidative stress Source: EcoCyc
Complete GO annotation...

Enzyme and pathway databases

BioCyciEcoCyc:G7227-MONOMER.
ECOL316407:JW2355-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative uncharacterized protein YfdO
Gene namesi
Name:yfdO
Ordered Locus Names:b2358, JW2355
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG14137. yfdO.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 122122Putative uncharacterized protein YfdOPRO_0000169207Add
BLAST

Interactioni

Protein-protein interaction databases

BioGridi4261573. 58 interactions.
IntActiP0AD35. 2 interactions.
STRINGi316407.85675372.

Structurei

3D structure databases

ProteinModelPortaliP0AD35.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the phage O protein family.Curated

Phylogenomic databases

HOGENOMiHOG000123869.
OMAiKNIMSPX.

Sequencei

Sequence statusi: Complete.

P0AD35-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTCAQWLWKK IIALYEQAAE CDGEVVRPKE PNWTAWANEI RLMCVQDGRT
60 70 80 90 100
HKQICEMYSR VSRDPFWCRN VLSPSKLREK WDELSLRLSP SVSTYTEKRE
110 120
DPYFKASYDN VDYSQIPAGF RG
Length:122
Mass (Da):14,401
Last modified:November 22, 2005 - v1
Checksum:i4C05BB95C8C543E7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. Translation: BAA16223.2.
PIRiC65009.
RefSeqiWP_000128175.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiBAA16223; BAA16223; BAA16223.
KEGGiecj:JW2355.
PATRICi48664118. VBIEscCol107702_2399.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. Translation: BAA16223.2.
PIRiC65009.
RefSeqiWP_000128175.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP0AD35.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261573. 58 interactions.
IntActiP0AD35. 2 interactions.
STRINGi316407.85675372.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAA16223; BAA16223; BAA16223.
KEGGiecj:JW2355.
PATRICi48664118. VBIEscCol107702_2399.

Organism-specific databases

EchoBASEiEB3889.
EcoGeneiEG14137. yfdO.

Phylogenomic databases

HOGENOMiHOG000123869.
OMAiKNIMSPX.

Enzyme and pathway databases

BioCyciEcoCyc:G7227-MONOMER.
ECOL316407:JW2355-MONOMER.

Family and domain databases

ProtoNetiSearch...

Entry informationi

Entry nameiYFDO_ECOLI
AccessioniPrimary (citable) accession number: P0AD35
Secondary accession number(s): P76511, P76943
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 22, 2005
Last sequence update: November 22, 2005
Last modified: April 13, 2016
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Caution

Could be the product of a pseudogene.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.